PlantSME Plant secondary metabolism enzyme database

Cephalotus follicularis (cephalotus_follicularis)

Imported from atlas release summary for Cephalotus follicularis.

1157
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.9% Alkaloid pathway 23.68% Phenylpropanoid pathway 19.27% Flavonoid pathway 14.43% Rosmarinic acid pathway 7.0% Steroid pathway 5.7%
Family Distribution
C4H 6.36% C3'H/CYP98A 6.15% BAHD 4.98% UGT 4.91% UFGT 4.67% 7DLGT 4.52% T3O 4.38% CYP76 4.21%
Other Families 59.81%
More Families (95)
POD 116 4.1% IFS 114 4.03% 4CL 93 3.29% DWF4/CYP90B1 68 2.4% NMT 64 2.26% F3H 61 2.16% STR 55 1.94% F3'H/CYP75B 48 1.7% CAD 46 1.63% IFR 42 1.48% SMT1/SMT2/SMT3 42 1.48% CODM/T6ODM 41 1.45% CYP71 39 1.38% BR6OX2/CYP85A2 38 1.34% PYKS 36 1.27% CYP90D1 33 1.17% GS 30 1.06% TRI/TRII 27 0.95% LAC 25 0.88% CPD/CYP90A1 25 0.88% T16H 24 0.85% CAS 22 0.78% SGD 21 0.74% ANR 21 0.74% FNS 21 0.74% CSE 21 0.74% HCT 21 0.74% AACT 20 0.71% IO 19 0.67% CCR 19 0.67% TPS 19 0.67% F3'5'H/CYP75A 18 0.64% RAS 18 0.64% PMT 17 0.6% H6H 17 0.6% COMT 17 0.6% GES 15 0.53% PAL 15 0.53% TAT 15 0.53% LAMT 14 0.49% G8O/G8H 14 0.49% NCS 14 0.49% CYP51G1 14 0.49% F5H/CYP84A 13 0.46% BR6OX1/CYP85A1 13 0.46% COR 12 0.42% 7DLH 12 0.42% 16OMT 11 0.39% 8HGO 11 0.39% CNMT 11 0.39% ROT3/CYP90C1 10 0.35% SQS/FDFT1 8 0.28% BBE 7 0.25% ANS/LDOX 7 0.25% SLS 6 0.21% MPO 6 0.21% CHI 6 0.21% GGPPS 6 0.21% CYP719 5 0.18% DFR 5 0.18% CHS 5 0.18% CCoAOMT 5 0.18% CPR 5 0.18% ISY 4 0.14% HPPR 4 0.14% DET2 4 0.14% FPPS 4 0.14% TYDC_DDC 3 0.11% CYP80B1 3 0.11% SMO1/SMO2 3 0.11% SQE 3 0.11% PMK 3 0.11% MVK 3 0.11% MCT/IspD 3 0.11% HMGR 3 0.11% MVD 3 0.11% DXS 3 0.11% ADC 2 0.07% ODC 2 0.07% DWF1 2 0.07% IDI 2 0.07% DXR 2 0.07% CYP80F1 1 0.04% TDC 1 0.04% FLS 1 0.04% FK 1 0.04% HYD1 1 0.04% DWF7 1 0.04% CPI1 1 0.04% DWF5 1 0.04% MDS/IspF 1 0.04% CMK/IspE 1 0.04% HMGS 1 0.04% HDS/IspG 1 0.04% HDR/IspH 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 346 20 UGT (134) View species results
Alkaloid pathway 274 21 7DLGT (77) View species results
Phenylpropanoid pathway 223 11 POD (107) View species results
Flavonoid pathway 167 10 UFGT (119) View species results
Rosmarinic acid pathway 81 7 C4H (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1114 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 180 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HMGR
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Gene Pathway Family Confidence Status Best Target
Cfolscaffold24960136010 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Cfolscaffold35600198940 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Cfolscaffold4350235300 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI