PlantSME Plant secondary metabolism enzyme database

Cercis chinensis (cercis_chinensis)

Imported from atlas release summary for Cercis chinensis.

1076
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.77% Alkaloid pathway 22.12% Phenylpropanoid pathway 21.84% Flavonoid pathway 13.94% Rosmarinic acid pathway 8.64% Steroid pathway 6.69%
Family Distribution
BAHD 5.52% C4H 5.33% C3'H/CYP98A 5.14% POD 4.41% 4CL 4.26% UGT 3.87% CYP76 3.72% 7DLGT 3.57%
Other Families 64.19%
More Families (95)
IFS 89 3.41% F3H 85 3.26% T3O 84 3.22% UFGT 84 3.22% NMT 63 2.42% CODM/T6ODM 54 2.07% DWF4/CYP90B1 54 2.07% STR 52 1.99% H6H 46 1.76% F3'H/CYP75B 44 1.69% SMT1/SMT2/SMT3 41 1.57% PYKS 37 1.42% BR6OX2/CYP85A2 36 1.38% TRI/TRII 35 1.34% CAS 35 1.34% IFR 34 1.3% CAD 30 1.15% GS 27 1.04% HCT 27 1.04% RAS 27 1.04% T16H 26 1.0% LAC 24 0.92% CSE 24 0.92% CYP90D1 23 0.88% CYP71 22 0.84% SGD 21 0.81% BBE 21 0.81% FNS 20 0.77% ANS/LDOX 20 0.77% COMT 20 0.77% TPS 20 0.77% COR 19 0.73% PMT 19 0.73% LAMT 18 0.69% GES 18 0.69% CHS 17 0.65% ANR 17 0.65% F5H/CYP84A 17 0.65% CYP51G1 16 0.61% 7DLH 15 0.58% F3'5'H/CYP75A 15 0.58% NCS 14 0.54% G8O/G8H 14 0.54% IO 13 0.5% TAT 13 0.5% PAL 12 0.46% CCR 12 0.46% BR6OX1/CYP85A1 12 0.46% SLS 11 0.42% 16OMT 11 0.42% 8HGO 10 0.38% CNMT 10 0.38% CHI 9 0.35% CCoAOMT 9 0.35% CPR 8 0.31% SQS/FDFT1 8 0.31% AACT 8 0.31% ROT3/CYP90C1 7 0.27% FPPS 7 0.27% DXS 6 0.23% GGPPS 6 0.23% DFR 5 0.19% SMO1/SMO2 5 0.19% SQE 5 0.19% XMT_MXMT_DXMT 4 0.15% MPO 4 0.15% FLS 4 0.15% CPD/CYP90A1 4 0.15% DET2 4 0.15% CYP80B1 3 0.12% CYP719 3 0.12% ISY 3 0.12% MVK 3 0.12% PMK 3 0.12% MVD 3 0.12% TDC 2 0.08% ADC 2 0.08% HMGS 2 0.08% HMGR 2 0.08% MCT/IspD 2 0.08% TYDC_DDC 1 0.04% 6OMT_4OMT_SOMT 1 0.04% ODC 1 0.04% HPPR 1 0.04% FK 1 0.04% HYD1 1 0.04% DWF7 1 0.04% DWF1 1 0.04% DWF5 1 0.04% IDI 1 0.04% DXR 1 0.04% MDS/IspF 1 0.04% HDS/IspG 1 0.04% CMK/IspE 1 0.04% HDR/IspH 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 288 19 BAHD (116) View species results
Alkaloid pathway 238 25 7DLGT (34) View species results
Phenylpropanoid pathway 235 12 POD (106) View species results
Flavonoid pathway 150 10 UFGT (80) View species results
Rosmarinic acid pathway 93 7 C4H (34) View species results
Steroid pathway 72 10 CAS (29) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 198 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: XMT_MXMT_DXMT
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Gene Pathway Family Confidence Status Best Target
cercis_chinensis_GWHPBHAK003947 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00002__sp_A0A0S2PM92_TCS1F_CAMCR
cercis_chinensis_GWHPBHAK015406 Alkaloid XMT_MXMT_DXMT low borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
cercis_chinensis_GWHPBHAK015407 Alkaloid XMT_MXMT_DXMT medium pass XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
cercis_chinensis_GWHPBHAK026348 Alkaloid XMT_MXMT_DXMT low borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA