PlantSME Plant secondary metabolism enzyme database

Chrysanthemum nankingense (chrysanthemum_nankingense)

Imported from atlas release summary for Chrysanthemum nankingense.

3429
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.31% Alkaloid pathway 20.68% Phenylpropanoid pathway 19.6% Flavonoid pathway 12.13% Rosmarinic acid pathway 9.51% Steroid pathway 5.77%
Family Distribution
C4H 6.88% C3'H/CYP98A 6.32% BAHD 5.55% CYP76 4.73% UGT 4.33% IFS 4.2% 7DLGT 3.71% UFGT 3.58%
Other Families 60.7%
More Families (97)
T3O 257 3.04% POD 257 3.04% 4CL 255 3.02% BR6OX2/CYP85A2 194 2.29% F3H 185 2.19% DWF4/CYP90B1 185 2.19% F3'H/CYP75B 182 2.15% TPS 161 1.9% GES 146 1.73% CAS 146 1.73% NMT 142 1.68% CODM/T6ODM 128 1.51% CAD 128 1.51% STR 114 1.35% TAT 107 1.27% H6H 96 1.14% LAC 94 1.11% SMT1/SMT2/SMT3 91 1.08% CYP71 91 1.08% G8O/G8H 90 1.06% T16H 90 1.06% HCT 85 1.01% IO 83 0.98% BBE 82 0.97% CYP90D1 82 0.97% TRI/TRII 81 0.96% CSE 71 0.84% COMT 68 0.8% F3'5'H/CYP75A 65 0.77% PYKS 58 0.69% SLS 53 0.63% GS 53 0.63% FNS 53 0.63% F5H/CYP84A 48 0.57% CCoAOMT 47 0.56% 16OMT 46 0.54% RAS 46 0.54% 7DLH 45 0.53% PMT 43 0.51% CPD/CYP90A1 43 0.51% NCS 42 0.5% CYP51G1 42 0.5% BR6OX1/CYP85A1 38 0.45% DFR 36 0.43% SGD 35 0.41% ANS/LDOX 33 0.39% PAL 33 0.39% IFR 33 0.39% CYP80B1 30 0.35% CCR 29 0.34% ANR 28 0.33% CYP719 25 0.3% COR 25 0.3% LAMT 24 0.28% FPPS 23 0.27% CPR 22 0.26% CHS 19 0.22% HPPR 19 0.22% MPO 18 0.21% 8HGO 18 0.21% ISY 18 0.21% SQE 18 0.21% HMGR 15 0.18% CYP80F1 13 0.15% TYDC_DDC 13 0.15% AACT 13 0.15% CHI 12 0.14% ROT3/CYP90C1 12 0.14% XMT_MXMT_DXMT 11 0.13% SQS/FDFT1 11 0.13% HDR/IspH 11 0.13% HDS/IspG 11 0.13% TDC 10 0.12% CNMT 10 0.12% DXS 10 0.12% 6OMT_4OMT_SOMT 8 0.09% GGPPS 8 0.09% DXR 7 0.08% DWF1 6 0.07% HYD1 6 0.07% ADC 5 0.06% MVD 5 0.06% SMO1/SMO2 4 0.05% PMK 4 0.05% DET2 3 0.04% FK 3 0.04% IDI 3 0.04% MCT/IspD 3 0.04% FLS 2 0.02% DWF7 2 0.02% MDS/IspF 2 0.02% CMK/IspE 2 0.02% GPPS 2 0.02% MVK 2 0.02% HMGS 2 0.02% DWF5 1 0.01% CPI1 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1108 20 BAHD (366) View species results
Alkaloid pathway 709 24 7DLGT (170) View species results
Phenylpropanoid pathway 672 13 POD (229) View species results
Flavonoid pathway 416 15 UFGT (267) View species results
Rosmarinic acid pathway 326 7 C4H (130) View species results
Steroid pathway 198 12 CAS (109) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3539 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 600 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DXR
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Gene Pathway Family Confidence Status Best Target
Cnanutg106486_pilon_pilon0012660.1 Terpenoid DXR high pass DXR__00001__sp_Q9XFS9_DXR_ARATH
Cnanutg19721_pilon_pilon0146130.1 Terpenoid DXR high pass DXR__00001__sp_Q9XFS9_DXR_ARATH
Cnanutg22898_pilon_pilon0197730.1 Terpenoid DXR medium pass DXR__00001__sp_Q9XFS9_DXR_ARATH
Cnanutg26137_pilon_pilon0240880.1 Terpenoid DXR low borderline DXR__00001__sp_Q9XFS9_DXR_ARATH
Cnanutg26137_pilon_pilon0240890.1 Terpenoid DXR medium pass DXR__00001__sp_Q9XFS9_DXR_ARATH
Cnanutg44091_pilon_pilon0377100.1 Terpenoid DXR medium pass DXR__00001__sp_Q9XFS9_DXR_ARATH
Cnanutg46875_pilon_pilon0393470.1 Terpenoid DXR low borderline DXR__00001__sp_Q9XFS9_DXR_ARATH