PlantSME Plant secondary metabolism enzyme database

Cinnamomum camphora (cinnamomum_camphora)

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Imported from atlas release summary for Cinnamomum camphora.

1061
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.82% Phenylpropanoid pathway 22.15% Alkaloid pathway 21.77% Flavonoid pathway 9.71% Rosmarinic acid pathway 7.82% Steroid pathway 7.73%
Family Distribution
C4H 6.15% BAHD 6.11% C3'H/CYP98A 5.17% POD 4.29% IFS 3.51% 4CL 3.24% CYP76 3.21% TPS 3.11%
Other Families 65.2%
More Families (96)
GES 89 3.01% UGT 88 2.97% NMT 78 2.64% CAD 77 2.6% CAS 76 2.57% 7DLGT 75 2.53% T3O 74 2.5% UFGT 70 2.36% DWF4/CYP90B1 70 2.36% F3H 60 2.03% F3'H/CYP75B 53 1.79% STR 51 1.72% CODM/T6ODM 46 1.55% T16H 41 1.39% SMT1/SMT2/SMT3 41 1.39% CYP71 41 1.39% BR6OX2/CYP85A2 38 1.28% H6H 34 1.15% COMT 32 1.08% HCT 30 1.01% CYP90D1 27 0.91% G8O/G8H 25 0.84% FNS 25 0.84% LAC 25 0.84% PYKS 24 0.81% TRI/TRII 24 0.81% IO 24 0.81% IFR 24 0.81% CSE 24 0.81% F5H/CYP84A 24 0.81% 7DLH 23 0.78% RAS 23 0.78% GS 21 0.71% CPD/CYP90A1 21 0.71% PMT 20 0.68% PAL 18 0.61% SLS 17 0.57% F3'5'H/CYP75A 17 0.57% COR 15 0.51% SGD 15 0.51% CYP719 15 0.51% BR6OX1/CYP85A1 14 0.47% AACT 14 0.47% TYDC_DDC 13 0.44% ANS/LDOX 13 0.44% CYP51G1 13 0.44% NCS 12 0.41% CNMT 12 0.41% CCR 12 0.41% CPR 12 0.41% 16OMT 11 0.37% BBE 11 0.37% ANR 11 0.37% GGPPS 10 0.34% MPO 9 0.3% 8HGO 9 0.3% TAT 8 0.27% ROT3/CYP90C1 8 0.27% XMT_MXMT_DXMT 7 0.24% SQS/FDFT1 7 0.24% MVD 7 0.24% CHI 6 0.2% DFR 6 0.2% CCoAOMT 6 0.2% DET2 6 0.2% DXS 6 0.2% FPPS 6 0.2% LAMT 5 0.17% HPPR 5 0.17% SQE 4 0.14% SMO1/SMO2 4 0.14% CYP80B1 3 0.1% ISY 3 0.1% 6OMT_4OMT_SOMT 3 0.1% DWF1 3 0.1% IDI 3 0.1% HDR/IspH 3 0.1% MVK 3 0.1% MCT/IspD 3 0.1% FLS 2 0.07% CPI1 2 0.07% DWF7 2 0.07% HYD1 2 0.07% HMGR 2 0.07% HDS/IspG 2 0.07% HMGS 2 0.07% TDC 1 0.03% ODC 1 0.03% ADC 1 0.03% CHS 1 0.03% FK 1 0.03% DWF5 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% MDS/IspF 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 327 19 BAHD (132) View species results
Phenylpropanoid pathway 235 11 POD (103) View species results
Alkaloid pathway 231 23 GES (59) View species results
Flavonoid pathway 103 10 UFGT (60) View species results
Rosmarinic acid pathway 83 7 C4H (32) View species results
Steroid pathway 82 12 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1082 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
cinnamomum_camphora_GWHPBGXC012904 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
cinnamomum_camphora_GWHPBGXC013409 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC013464 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
cinnamomum_camphora_GWHPBGXC016271 Phenylpropanoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC019767 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC020096 Phenylpropanoid 4CL medium pass 4CL__00009__sp_Q67W82_4CL4_ORYSJ
cinnamomum_camphora_GWHPBGXC021319 Phenylpropanoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
cinnamomum_camphora_GWHPBGXC023399 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
cinnamomum_camphora_GWHPBGXC024673 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
cinnamomum_camphora_GWHPBGXC025816 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC026640 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC026706 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC027188 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
cinnamomum_camphora_GWHPBGXC028027 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
cinnamomum_camphora_GWHPBGXC000871 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
cinnamomum_camphora_GWHPBGXC002180 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
cinnamomum_camphora_GWHPBGXC002316 Rosmarinic Acid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
cinnamomum_camphora_GWHPBGXC003297 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
cinnamomum_camphora_GWHPBGXC004538 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
cinnamomum_camphora_GWHPBGXC005494 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
cinnamomum_camphora_GWHPBGXC006902 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
cinnamomum_camphora_GWHPBGXC007433 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
cinnamomum_camphora_GWHPBGXC007435 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
cinnamomum_camphora_GWHPBGXC007812 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
cinnamomum_camphora_GWHPBGXC008176 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
cinnamomum_camphora_GWHPBGXC008833 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
cinnamomum_camphora_GWHPBGXC010826 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
cinnamomum_camphora_GWHPBGXC011337 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC011338 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC011339 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC011563 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC012120 Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
cinnamomum_camphora_GWHPBGXC012904 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
cinnamomum_camphora_GWHPBGXC013409 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC013464 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
cinnamomum_camphora_GWHPBGXC016271 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC019767 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC020096 Rosmarinic Acid 4CL medium pass 4CL__00009__sp_Q67W82_4CL4_ORYSJ
cinnamomum_camphora_GWHPBGXC021319 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
cinnamomum_camphora_GWHPBGXC023399 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
cinnamomum_camphora_GWHPBGXC024673 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
cinnamomum_camphora_GWHPBGXC025816 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC026640 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC026706 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
cinnamomum_camphora_GWHPBGXC027188 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
cinnamomum_camphora_GWHPBGXC028027 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH