PlantSME Plant secondary metabolism enzyme database

Cinnamomum camphora (cinnamomum_camphora)

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Imported from atlas release summary for Cinnamomum camphora.

1061
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.82% Phenylpropanoid pathway 22.15% Alkaloid pathway 21.77% Flavonoid pathway 9.71% Rosmarinic acid pathway 7.82% Steroid pathway 7.73%
Family Distribution
C4H 6.15% BAHD 6.11% C3'H/CYP98A 5.17% POD 4.29% IFS 3.51% 4CL 3.24% CYP76 3.21% TPS 3.11%
Other Families 65.2%
More Families (96)
GES 89 3.01% UGT 88 2.97% NMT 78 2.64% CAD 77 2.6% CAS 76 2.57% 7DLGT 75 2.53% T3O 74 2.5% UFGT 70 2.36% DWF4/CYP90B1 70 2.36% F3H 60 2.03% F3'H/CYP75B 53 1.79% STR 51 1.72% CODM/T6ODM 46 1.55% T16H 41 1.39% SMT1/SMT2/SMT3 41 1.39% CYP71 41 1.39% BR6OX2/CYP85A2 38 1.28% H6H 34 1.15% COMT 32 1.08% HCT 30 1.01% CYP90D1 27 0.91% G8O/G8H 25 0.84% FNS 25 0.84% LAC 25 0.84% PYKS 24 0.81% TRI/TRII 24 0.81% IO 24 0.81% IFR 24 0.81% CSE 24 0.81% F5H/CYP84A 24 0.81% 7DLH 23 0.78% RAS 23 0.78% GS 21 0.71% CPD/CYP90A1 21 0.71% PMT 20 0.68% PAL 18 0.61% SLS 17 0.57% F3'5'H/CYP75A 17 0.57% COR 15 0.51% SGD 15 0.51% CYP719 15 0.51% BR6OX1/CYP85A1 14 0.47% AACT 14 0.47% TYDC_DDC 13 0.44% ANS/LDOX 13 0.44% CYP51G1 13 0.44% NCS 12 0.41% CNMT 12 0.41% CCR 12 0.41% CPR 12 0.41% 16OMT 11 0.37% BBE 11 0.37% ANR 11 0.37% GGPPS 10 0.34% MPO 9 0.3% 8HGO 9 0.3% TAT 8 0.27% ROT3/CYP90C1 8 0.27% XMT_MXMT_DXMT 7 0.24% SQS/FDFT1 7 0.24% MVD 7 0.24% CHI 6 0.2% DFR 6 0.2% CCoAOMT 6 0.2% DET2 6 0.2% DXS 6 0.2% FPPS 6 0.2% LAMT 5 0.17% HPPR 5 0.17% SQE 4 0.14% SMO1/SMO2 4 0.14% CYP80B1 3 0.1% ISY 3 0.1% 6OMT_4OMT_SOMT 3 0.1% DWF1 3 0.1% IDI 3 0.1% HDR/IspH 3 0.1% MVK 3 0.1% MCT/IspD 3 0.1% FLS 2 0.07% CPI1 2 0.07% DWF7 2 0.07% HYD1 2 0.07% HMGR 2 0.07% HDS/IspG 2 0.07% HMGS 2 0.07% TDC 1 0.03% ODC 1 0.03% ADC 1 0.03% CHS 1 0.03% FK 1 0.03% DWF5 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% MDS/IspF 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 327 19 BAHD (132) View species results
Phenylpropanoid pathway 235 11 POD (103) View species results
Alkaloid pathway 231 23 GES (59) View species results
Flavonoid pathway 103 10 UFGT (60) View species results
Rosmarinic acid pathway 83 7 C4H (32) View species results
Steroid pathway 82 12 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1082 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
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Gene Pathway Family Confidence Status Best Target
cinnamomum_camphora_GWHPBGXC001120 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC001122 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC001123 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC001125 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC004613 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC004615 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC005816 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC006516 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
cinnamomum_camphora_GWHPBGXC006878 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC009766 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC009767 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC010078 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC010860 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC011345 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC011426 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC012254 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC012527 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC012940 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC013468 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC014677 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC015696 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC015697 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC015699 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC015700 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC015701 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC015702 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC015809 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC016016 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC016292 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC017936 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC018610 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
cinnamomum_camphora_GWHPBGXC019014 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC019893 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC019908 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC022454 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC023611 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
cinnamomum_camphora_GWHPBGXC025329 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC025644 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
cinnamomum_camphora_GWHPBGXC025908 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC027074 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
cinnamomum_camphora_GWHPBGXC027841 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH