Cinnamomum camphora (cinnamomum_camphora)
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Imported from atlas release summary for Cinnamomum camphora.
1061
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1061
Candidate Genes
C4H
6.15%
BAHD
6.11%
C3'H/CYP98A
5.17%
POD
4.29%
IFS
3.51%
4CL
3.24%
CYP76
3.21%
TPS
3.11%
Other Families
65.2%
More Families (96)
GES
89
3.01%
UGT
88
2.97%
NMT
78
2.64%
CAD
77
2.6%
CAS
76
2.57%
7DLGT
75
2.53%
T3O
74
2.5%
UFGT
70
2.36%
DWF4/CYP90B1
70
2.36%
F3H
60
2.03%
F3'H/CYP75B
53
1.79%
STR
51
1.72%
CODM/T6ODM
46
1.55%
T16H
41
1.39%
SMT1/SMT2/SMT3
41
1.39%
CYP71
41
1.39%
BR6OX2/CYP85A2
38
1.28%
H6H
34
1.15%
COMT
32
1.08%
HCT
30
1.01%
CYP90D1
27
0.91%
G8O/G8H
25
0.84%
FNS
25
0.84%
LAC
25
0.84%
PYKS
24
0.81%
TRI/TRII
24
0.81%
IO
24
0.81%
IFR
24
0.81%
CSE
24
0.81%
F5H/CYP84A
24
0.81%
7DLH
23
0.78%
RAS
23
0.78%
GS
21
0.71%
CPD/CYP90A1
21
0.71%
PMT
20
0.68%
PAL
18
0.61%
SLS
17
0.57%
F3'5'H/CYP75A
17
0.57%
COR
15
0.51%
SGD
15
0.51%
CYP719
15
0.51%
BR6OX1/CYP85A1
14
0.47%
AACT
14
0.47%
TYDC_DDC
13
0.44%
ANS/LDOX
13
0.44%
CYP51G1
13
0.44%
NCS
12
0.41%
CNMT
12
0.41%
CCR
12
0.41%
CPR
12
0.41%
16OMT
11
0.37%
BBE
11
0.37%
ANR
11
0.37%
GGPPS
10
0.34%
MPO
9
0.3%
8HGO
9
0.3%
TAT
8
0.27%
ROT3/CYP90C1
8
0.27%
XMT_MXMT_DXMT
7
0.24%
SQS/FDFT1
7
0.24%
MVD
7
0.24%
CHI
6
0.2%
DFR
6
0.2%
CCoAOMT
6
0.2%
DET2
6
0.2%
DXS
6
0.2%
FPPS
6
0.2%
LAMT
5
0.17%
HPPR
5
0.17%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
CYP80B1
3
0.1%
ISY
3
0.1%
6OMT_4OMT_SOMT
3
0.1%
DWF1
3
0.1%
IDI
3
0.1%
HDR/IspH
3
0.1%
MVK
3
0.1%
MCT/IspD
3
0.1%
FLS
2
0.07%
CPI1
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
HMGR
2
0.07%
HDS/IspG
2
0.07%
HMGS
2
0.07%
TDC
1
0.03%
ODC
1
0.03%
ADC
1
0.03%
CHS
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
DXR
1
0.03%
CMK/IspE
1
0.03%
MDS/IspF
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 327 | 19 | BAHD (132) | View species results |
| Phenylpropanoid pathway | 235 | 11 | POD (103) | View species results |
| Alkaloid pathway | 231 | 23 | GES (59) | View species results |
| Flavonoid pathway | 103 | 10 | UFGT (60) | View species results |
| Rosmarinic acid pathway | 83 | 7 | C4H (32) | View species results |
| Steroid pathway | 82 | 12 | CAS (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1082 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 234 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| cinnamomum_camphora_GWHPBGXC015983 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| cinnamomum_camphora_GWHPBGXC017097 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| cinnamomum_camphora_GWHPBGXC017098 | Terpenoid | CYP76 | low | borderline | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| cinnamomum_camphora_GWHPBGXC017350 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| cinnamomum_camphora_GWHPBGXC017393 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| cinnamomum_camphora_GWHPBGXC018070 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC018071 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| cinnamomum_camphora_GWHPBGXC019531 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC019556 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| cinnamomum_camphora_GWHPBGXC019606 | Terpenoid | CYP76 | medium | pass | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| cinnamomum_camphora_GWHPBGXC019749 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| cinnamomum_camphora_GWHPBGXC019750 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| cinnamomum_camphora_GWHPBGXC019970 | Terpenoid | CYP76 | medium | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| cinnamomum_camphora_GWHPBGXC020463 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| cinnamomum_camphora_GWHPBGXC020858 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC020859 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| cinnamomum_camphora_GWHPBGXC020860 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| cinnamomum_camphora_GWHPBGXC020861 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC020864 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC021070 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC021071 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| cinnamomum_camphora_GWHPBGXC021445 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC022001 | Terpenoid | CYP76 | low | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| cinnamomum_camphora_GWHPBGXC022875 | Terpenoid | CYP76 | low | borderline | CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT |
| cinnamomum_camphora_GWHPBGXC022949 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| cinnamomum_camphora_GWHPBGXC023005 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| cinnamomum_camphora_GWHPBGXC023449 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| cinnamomum_camphora_GWHPBGXC023576 | Terpenoid | CYP76 | low | borderline | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| cinnamomum_camphora_GWHPBGXC023764 | Terpenoid | CYP76 | low | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| cinnamomum_camphora_GWHPBGXC024383 | Terpenoid | CYP76 | medium | pass | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| cinnamomum_camphora_GWHPBGXC024857 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| cinnamomum_camphora_GWHPBGXC025418 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC025854 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| cinnamomum_camphora_GWHPBGXC025855 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| cinnamomum_camphora_GWHPBGXC026221 | Terpenoid | CYP76 | low | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |
| cinnamomum_camphora_GWHPBGXC026223 | Terpenoid | CYP76 | low | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |
| cinnamomum_camphora_GWHPBGXC026224 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| cinnamomum_camphora_GWHPBGXC026227 | Terpenoid | CYP76 | low | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |
| cinnamomum_camphora_GWHPBGXC026298 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| cinnamomum_camphora_GWHPBGXC026466 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| cinnamomum_camphora_GWHPBGXC026549 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| cinnamomum_camphora_GWHPBGXC026551 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| cinnamomum_camphora_GWHPBGXC026722 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| cinnamomum_camphora_GWHPBGXC026734 | Terpenoid | CYP76 | low | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| cinnamomum_camphora_GWHPBGXC027889 | Terpenoid | CYP76 | low | borderline | CYP76__00018__sp_Q69X58_C76M7_ORYSJ |