PlantSME Plant secondary metabolism enzyme database

Cinnamomum camphora (cinnamomum_camphora)

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Imported from atlas release summary for Cinnamomum camphora.

1061
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.82% Phenylpropanoid pathway 22.15% Alkaloid pathway 21.77% Flavonoid pathway 9.71% Rosmarinic acid pathway 7.82% Steroid pathway 7.73%
Family Distribution
C4H 6.15% BAHD 6.11% C3'H/CYP98A 5.17% POD 4.29% IFS 3.51% 4CL 3.24% CYP76 3.21% TPS 3.11%
Other Families 65.2%
More Families (96)
GES 89 3.01% UGT 88 2.97% NMT 78 2.64% CAD 77 2.6% CAS 76 2.57% 7DLGT 75 2.53% T3O 74 2.5% UFGT 70 2.36% DWF4/CYP90B1 70 2.36% F3H 60 2.03% F3'H/CYP75B 53 1.79% STR 51 1.72% CODM/T6ODM 46 1.55% T16H 41 1.39% SMT1/SMT2/SMT3 41 1.39% CYP71 41 1.39% BR6OX2/CYP85A2 38 1.28% H6H 34 1.15% COMT 32 1.08% HCT 30 1.01% CYP90D1 27 0.91% G8O/G8H 25 0.84% FNS 25 0.84% LAC 25 0.84% PYKS 24 0.81% TRI/TRII 24 0.81% IO 24 0.81% IFR 24 0.81% CSE 24 0.81% F5H/CYP84A 24 0.81% 7DLH 23 0.78% RAS 23 0.78% GS 21 0.71% CPD/CYP90A1 21 0.71% PMT 20 0.68% PAL 18 0.61% SLS 17 0.57% F3'5'H/CYP75A 17 0.57% COR 15 0.51% SGD 15 0.51% CYP719 15 0.51% BR6OX1/CYP85A1 14 0.47% AACT 14 0.47% TYDC_DDC 13 0.44% ANS/LDOX 13 0.44% CYP51G1 13 0.44% NCS 12 0.41% CNMT 12 0.41% CCR 12 0.41% CPR 12 0.41% 16OMT 11 0.37% BBE 11 0.37% ANR 11 0.37% GGPPS 10 0.34% MPO 9 0.3% 8HGO 9 0.3% TAT 8 0.27% ROT3/CYP90C1 8 0.27% XMT_MXMT_DXMT 7 0.24% SQS/FDFT1 7 0.24% MVD 7 0.24% CHI 6 0.2% DFR 6 0.2% CCoAOMT 6 0.2% DET2 6 0.2% DXS 6 0.2% FPPS 6 0.2% LAMT 5 0.17% HPPR 5 0.17% SQE 4 0.14% SMO1/SMO2 4 0.14% CYP80B1 3 0.1% ISY 3 0.1% 6OMT_4OMT_SOMT 3 0.1% DWF1 3 0.1% IDI 3 0.1% HDR/IspH 3 0.1% MVK 3 0.1% MCT/IspD 3 0.1% FLS 2 0.07% CPI1 2 0.07% DWF7 2 0.07% HYD1 2 0.07% HMGR 2 0.07% HDS/IspG 2 0.07% HMGS 2 0.07% TDC 1 0.03% ODC 1 0.03% ADC 1 0.03% CHS 1 0.03% FK 1 0.03% DWF5 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% MDS/IspF 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 327 19 BAHD (132) View species results
Phenylpropanoid pathway 235 11 POD (103) View species results
Alkaloid pathway 231 23 GES (59) View species results
Flavonoid pathway 103 10 UFGT (60) View species results
Rosmarinic acid pathway 83 7 C4H (32) View species results
Steroid pathway 82 12 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1082 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
cinnamomum_camphora_GWHPBGXC024326 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
cinnamomum_camphora_GWHPBGXC024426 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC024639 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
cinnamomum_camphora_GWHPBGXC024795 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
cinnamomum_camphora_GWHPBGXC025111 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
cinnamomum_camphora_GWHPBGXC025806 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
cinnamomum_camphora_GWHPBGXC025822 Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC026054 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
cinnamomum_camphora_GWHPBGXC026152 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
cinnamomum_camphora_GWHPBGXC026374 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
cinnamomum_camphora_GWHPBGXC026403 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
cinnamomum_camphora_GWHPBGXC026699 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
cinnamomum_camphora_GWHPBGXC026857 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
cinnamomum_camphora_GWHPBGXC026884 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
cinnamomum_camphora_GWHPBGXC027142 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
cinnamomum_camphora_GWHPBGXC027174 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
cinnamomum_camphora_GWHPBGXC027248 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
cinnamomum_camphora_GWHPBGXC027456 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC027459 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC027460 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC027463 Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC027464 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC027465 Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC027469 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
cinnamomum_camphora_GWHPBGXC027754 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
cinnamomum_camphora_GWHPBGXC028028 Phenylpropanoid POD low borderline POD__00006__sp_O22850_GPX3_ARATH
cinnamomum_camphora_GWHPBGXC028029 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH