Cinnamomum camphora (cinnamomum_camphora)
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Imported from atlas release summary for Cinnamomum camphora.
1061
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1061
Candidate Genes
C4H
6.15%
BAHD
6.11%
C3'H/CYP98A
5.17%
POD
4.29%
IFS
3.51%
4CL
3.24%
CYP76
3.21%
TPS
3.11%
Other Families
65.2%
More Families (96)
GES
89
3.01%
UGT
88
2.97%
NMT
78
2.64%
CAD
77
2.6%
CAS
76
2.57%
7DLGT
75
2.53%
T3O
74
2.5%
UFGT
70
2.36%
DWF4/CYP90B1
70
2.36%
F3H
60
2.03%
F3'H/CYP75B
53
1.79%
STR
51
1.72%
CODM/T6ODM
46
1.55%
T16H
41
1.39%
SMT1/SMT2/SMT3
41
1.39%
CYP71
41
1.39%
BR6OX2/CYP85A2
38
1.28%
H6H
34
1.15%
COMT
32
1.08%
HCT
30
1.01%
CYP90D1
27
0.91%
G8O/G8H
25
0.84%
FNS
25
0.84%
LAC
25
0.84%
PYKS
24
0.81%
TRI/TRII
24
0.81%
IO
24
0.81%
IFR
24
0.81%
CSE
24
0.81%
F5H/CYP84A
24
0.81%
7DLH
23
0.78%
RAS
23
0.78%
GS
21
0.71%
CPD/CYP90A1
21
0.71%
PMT
20
0.68%
PAL
18
0.61%
SLS
17
0.57%
F3'5'H/CYP75A
17
0.57%
COR
15
0.51%
SGD
15
0.51%
CYP719
15
0.51%
BR6OX1/CYP85A1
14
0.47%
AACT
14
0.47%
TYDC_DDC
13
0.44%
ANS/LDOX
13
0.44%
CYP51G1
13
0.44%
NCS
12
0.41%
CNMT
12
0.41%
CCR
12
0.41%
CPR
12
0.41%
16OMT
11
0.37%
BBE
11
0.37%
ANR
11
0.37%
GGPPS
10
0.34%
MPO
9
0.3%
8HGO
9
0.3%
TAT
8
0.27%
ROT3/CYP90C1
8
0.27%
XMT_MXMT_DXMT
7
0.24%
SQS/FDFT1
7
0.24%
MVD
7
0.24%
CHI
6
0.2%
DFR
6
0.2%
CCoAOMT
6
0.2%
DET2
6
0.2%
DXS
6
0.2%
FPPS
6
0.2%
LAMT
5
0.17%
HPPR
5
0.17%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
CYP80B1
3
0.1%
ISY
3
0.1%
6OMT_4OMT_SOMT
3
0.1%
DWF1
3
0.1%
IDI
3
0.1%
HDR/IspH
3
0.1%
MVK
3
0.1%
MCT/IspD
3
0.1%
FLS
2
0.07%
CPI1
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
HMGR
2
0.07%
HDS/IspG
2
0.07%
HMGS
2
0.07%
TDC
1
0.03%
ODC
1
0.03%
ADC
1
0.03%
CHS
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
DXR
1
0.03%
CMK/IspE
1
0.03%
MDS/IspF
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 327 | 19 | BAHD (132) | View species results |
| Phenylpropanoid pathway | 235 | 11 | POD (103) | View species results |
| Alkaloid pathway | 231 | 23 | GES (59) | View species results |
| Flavonoid pathway | 103 | 10 | UFGT (60) | View species results |
| Rosmarinic acid pathway | 83 | 7 | C4H (32) | View species results |
| Steroid pathway | 82 | 12 | CAS (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1082 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 234 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| cinnamomum_camphora_GWHPBGXC013323 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| cinnamomum_camphora_GWHPBGXC013324 | Terpenoid | TPS | medium | pass | TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD |
| cinnamomum_camphora_GWHPBGXC013330 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| cinnamomum_camphora_GWHPBGXC013331 | Terpenoid | TPS | medium | pass | TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD |
| cinnamomum_camphora_GWHPBGXC013332 | Terpenoid | TPS | medium | pass | TPS__00137__sp_J9RLZ7_TPS1_VALOF |
| cinnamomum_camphora_GWHPBGXC013333 | Terpenoid | TPS | medium | pass | TPS__00016__sp_A0A1V0E492_TPS1_PIPNI |
| cinnamomum_camphora_GWHPBGXC013334 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| cinnamomum_camphora_GWHPBGXC013336 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| cinnamomum_camphora_GWHPBGXC013337 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| cinnamomum_camphora_GWHPBGXC013340 | Terpenoid | TPS | medium | pass | TPS__00051__sp_A0A7G5KLV1_TPS2_CANOD |
| cinnamomum_camphora_GWHPBGXC013341 | Terpenoid | TPS | low | borderline | TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA |
| cinnamomum_camphora_GWHPBGXC013342 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| cinnamomum_camphora_GWHPBGXC013345 | Terpenoid | TPS | low | borderline | TPS__00016__sp_A0A1V0E492_TPS1_PIPNI |
| cinnamomum_camphora_GWHPBGXC016677 | Terpenoid | TPS | medium | pass | TPS__00112__sp_G0Y7D3_TPS3_LITCU |
| cinnamomum_camphora_GWHPBGXC016696 | Terpenoid | TPS | medium | pass | TPS__00112__sp_G0Y7D3_TPS3_LITCU |
| cinnamomum_camphora_GWHPBGXC016702 | Terpenoid | TPS | low | borderline | TPS__00112__sp_G0Y7D3_TPS3_LITCU |
| cinnamomum_camphora_GWHPBGXC017352 | Terpenoid | TPS | medium | borderline | TPS__00052__sp_A0A7G5KLV2_TPS3_CANOD |
| cinnamomum_camphora_GWHPBGXC018957 | Terpenoid | TPS | medium | pass | TPS__00163__sp_Q675L5_TPSD2_PICAB |
| cinnamomum_camphora_GWHPBGXC018998 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022633 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| cinnamomum_camphora_GWHPBGXC022638 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| cinnamomum_camphora_GWHPBGXC022641 | Terpenoid | TPS | low | borderline | TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA |
| cinnamomum_camphora_GWHPBGXC022644 | Terpenoid | TPS | medium | pass | TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA |
| cinnamomum_camphora_GWHPBGXC022645 | Terpenoid | TPS | medium | pass | TPS__00111__sp_G0Y7D2_TPS2_LITCU |
| cinnamomum_camphora_GWHPBGXC022651 | Terpenoid | TPS | low | borderline | TPS__00111__sp_G0Y7D2_TPS2_LITCU |
| cinnamomum_camphora_GWHPBGXC022652 | Terpenoid | TPS | low | borderline | TPS__00026__sp_A0A1V0QSH1_TS6FN_CANSA |
| cinnamomum_camphora_GWHPBGXC022653 | Terpenoid | TPS | medium | pass | TPS__00112__sp_G0Y7D3_TPS3_LITCU |
| cinnamomum_camphora_GWHPBGXC022654 | Terpenoid | TPS | low | borderline | TPS__00111__sp_G0Y7D2_TPS2_LITCU |
| cinnamomum_camphora_GWHPBGXC022655 | Terpenoid | TPS | medium | pass | TPS__00111__sp_G0Y7D2_TPS2_LITCU |
| cinnamomum_camphora_GWHPBGXC022657 | Terpenoid | TPS | medium | pass | TPS__00112__sp_G0Y7D3_TPS3_LITCU |
| cinnamomum_camphora_GWHPBGXC022683 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022690 | Terpenoid | TPS | low | borderline | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022699 | Terpenoid | TPS | low | borderline | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022700 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022701 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022712 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022713 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| cinnamomum_camphora_GWHPBGXC022823 | Terpenoid | TPS | low | borderline | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| cinnamomum_camphora_GWHPBGXC022824 | Terpenoid | TPS | low | borderline | TPS__00016__sp_A0A1V0E492_TPS1_PIPNI |
| cinnamomum_camphora_GWHPBGXC022965 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| cinnamomum_camphora_GWHPBGXC023383 | Terpenoid | TPS | medium | pass | TPS__00111__sp_G0Y7D2_TPS2_LITCU |
| cinnamomum_camphora_GWHPBGXC023384 | Terpenoid | TPS | medium | pass | TPS__00111__sp_G0Y7D2_TPS2_LITCU |