Cinnamomum camphora (cinnamomum_camphora)
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Imported from atlas release summary for Cinnamomum camphora.
1448
Candidate Protein Records
1061
Pathway-Level Records
2960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2960
Family-Level Calls
C4H
6.15%
BAHD
6.11%
C3'H/CYP98A
5.17%
POD
4.29%
IFS
3.51%
4CL
3.24%
CYP76
3.21%
TPS
3.11%
Other Families
65.2%
More Families (96)
GES
89
3.01%
UGT
88
2.97%
NMT
78
2.64%
CAD
77
2.6%
CAS
76
2.57%
7DLGT
75
2.53%
T3O
74
2.5%
UFGT
70
2.36%
DWF4/CYP90B1
70
2.36%
F3H
60
2.03%
F3'H/CYP75B
53
1.79%
STR
51
1.72%
CODM/T6ODM
46
1.55%
T16H
41
1.39%
SMT1/SMT2/SMT3
41
1.39%
CYP71
41
1.39%
BR6OX2/CYP85A2
38
1.28%
H6H
34
1.15%
COMT
32
1.08%
HCT
30
1.01%
CYP90D1
27
0.91%
G8O/G8H
25
0.84%
FNS
25
0.84%
LAC
25
0.84%
PYKS
24
0.81%
TRI/TRII
24
0.81%
IO
24
0.81%
IFR
24
0.81%
CSE
24
0.81%
F5H/CYP84A
24
0.81%
7DLH
23
0.78%
RAS
23
0.78%
GS
21
0.71%
CPD/CYP90A1
21
0.71%
PMT
20
0.68%
PAL
18
0.61%
SLS
17
0.57%
F3'5'H/CYP75A
17
0.57%
COR
15
0.51%
SGD
15
0.51%
CYP719
15
0.51%
BR6OX1/CYP85A1
14
0.47%
AACT
14
0.47%
TYDC_DDC
13
0.44%
ANS/LDOX
13
0.44%
CYP51G1
13
0.44%
NCS
12
0.41%
CNMT
12
0.41%
CCR
12
0.41%
CPR
12
0.41%
16OMT
11
0.37%
BBE
11
0.37%
ANR
11
0.37%
GGPPS
10
0.34%
MPO
9
0.3%
8HGO
9
0.3%
TAT
8
0.27%
ROT3/CYP90C1
8
0.27%
XMT_MXMT_DXMT
7
0.24%
SQS/FDFT1
7
0.24%
MVD
7
0.24%
CHI
6
0.2%
DFR
6
0.2%
CCoAOMT
6
0.2%
DET2
6
0.2%
DXS
6
0.2%
FPPS
6
0.2%
LAMT
5
0.17%
HPPR
5
0.17%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
CYP80B1
3
0.1%
ISY
3
0.1%
6OMT_4OMT_SOMT
3
0.1%
DWF1
3
0.1%
IDI
3
0.1%
HDR/IspH
3
0.1%
MVK
3
0.1%
MCT/IspD
3
0.1%
FLS
2
0.07%
CPI1
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
HMGR
2
0.07%
HDS/IspG
2
0.07%
HMGS
2
0.07%
TDC
1
0.03%
ODC
1
0.03%
ADC
1
0.03%
CHS
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
DXR
1
0.03%
CMK/IspE
1
0.03%
MDS/IspF
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 327 | 19 | BAHD (132) | View species results |
| Phenylpropanoid pathway | 235 | 11 | POD (103) | View species results |
| Alkaloid pathway | 231 | 23 | GES (59) | View species results |
| Flavonoid pathway | 103 | 10 | UFGT (60) | View species results |
| Rosmarinic acid pathway | 83 | 7 | C4H (32) | View species results |
| Steroid pathway | 82 | 12 | CAS (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1082 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 234 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| cinnamomum_camphora_GWHPBGXC022122 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC022123 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC022124 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC022284 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC022289 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC022305 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC022676 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC023655 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC024058 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC024215 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC024216 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC024218 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC024392 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC024595 | Alkaloid | NMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC024596 | Alkaloid | NMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC024607 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC024763 | Alkaloid | NMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC024859 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC024975 | Alkaloid | NMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC025308 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC025944 | Alkaloid | NMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC026495 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC027311 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC028173 | Alkaloid | NMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC010920 | Alkaloid | ODC | low | borderline |
| cinnamomum_camphora_GWHPBGXC000635 | Alkaloid | PMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC005468 | Alkaloid | PMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC007809 | Alkaloid | PMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC010030 | Alkaloid | PMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC011236 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC012265 | Alkaloid | PMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC012741 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC012823 | Alkaloid | PMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC013203 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC013491 | Alkaloid | PMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC013495 | Alkaloid | PMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC016436 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC018866 | Alkaloid | PMT | medium | borderline |
| cinnamomum_camphora_GWHPBGXC019032 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC021384 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC021386 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC021677 | Alkaloid | PMT | medium | pass |
| cinnamomum_camphora_GWHPBGXC024801 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC024802 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC024804 | Alkaloid | PMT | low | borderline |
| cinnamomum_camphora_GWHPBGXC000003 | Alkaloid | PYKS | low | borderline |
| cinnamomum_camphora_GWHPBGXC004958 | Alkaloid | PYKS | low | borderline |
| cinnamomum_camphora_GWHPBGXC005351 | Alkaloid | PYKS | low | borderline |
| cinnamomum_camphora_GWHPBGXC006352 | Alkaloid | PYKS | low | borderline |
| cinnamomum_camphora_GWHPBGXC007011 | Alkaloid | PYKS | low | borderline |