PlantSME Plant secondary metabolism enzyme database

Cinnamomum camphora (cinnamomum_camphora)

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Imported from atlas release summary for Cinnamomum camphora.

1448
Candidate Protein Records
1061
Pathway-Level Records
2960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.82% Phenylpropanoid pathway 22.15% Alkaloid pathway 21.77% Flavonoid pathway 9.71% Rosmarinic acid pathway 7.82% Steroid pathway 7.73%
Family Distribution
C4H 6.15% BAHD 6.11% C3'H/CYP98A 5.17% POD 4.29% IFS 3.51% 4CL 3.24% CYP76 3.21% TPS 3.11%
Other Families 65.2%
More Families (96)
GES 89 3.01% UGT 88 2.97% NMT 78 2.64% CAD 77 2.6% CAS 76 2.57% 7DLGT 75 2.53% T3O 74 2.5% UFGT 70 2.36% DWF4/CYP90B1 70 2.36% F3H 60 2.03% F3'H/CYP75B 53 1.79% STR 51 1.72% CODM/T6ODM 46 1.55% T16H 41 1.39% SMT1/SMT2/SMT3 41 1.39% CYP71 41 1.39% BR6OX2/CYP85A2 38 1.28% H6H 34 1.15% COMT 32 1.08% HCT 30 1.01% CYP90D1 27 0.91% G8O/G8H 25 0.84% FNS 25 0.84% LAC 25 0.84% PYKS 24 0.81% TRI/TRII 24 0.81% IO 24 0.81% IFR 24 0.81% CSE 24 0.81% F5H/CYP84A 24 0.81% 7DLH 23 0.78% RAS 23 0.78% GS 21 0.71% CPD/CYP90A1 21 0.71% PMT 20 0.68% PAL 18 0.61% SLS 17 0.57% F3'5'H/CYP75A 17 0.57% COR 15 0.51% SGD 15 0.51% CYP719 15 0.51% BR6OX1/CYP85A1 14 0.47% AACT 14 0.47% TYDC_DDC 13 0.44% ANS/LDOX 13 0.44% CYP51G1 13 0.44% NCS 12 0.41% CNMT 12 0.41% CCR 12 0.41% CPR 12 0.41% 16OMT 11 0.37% BBE 11 0.37% ANR 11 0.37% GGPPS 10 0.34% MPO 9 0.3% 8HGO 9 0.3% TAT 8 0.27% ROT3/CYP90C1 8 0.27% XMT_MXMT_DXMT 7 0.24% SQS/FDFT1 7 0.24% MVD 7 0.24% CHI 6 0.2% DFR 6 0.2% CCoAOMT 6 0.2% DET2 6 0.2% DXS 6 0.2% FPPS 6 0.2% LAMT 5 0.17% HPPR 5 0.17% SQE 4 0.14% SMO1/SMO2 4 0.14% CYP80B1 3 0.1% ISY 3 0.1% 6OMT_4OMT_SOMT 3 0.1% DWF1 3 0.1% IDI 3 0.1% HDR/IspH 3 0.1% MVK 3 0.1% MCT/IspD 3 0.1% FLS 2 0.07% CPI1 2 0.07% DWF7 2 0.07% HYD1 2 0.07% HMGR 2 0.07% HDS/IspG 2 0.07% HMGS 2 0.07% TDC 1 0.03% ODC 1 0.03% ADC 1 0.03% CHS 1 0.03% FK 1 0.03% DWF5 1 0.03% DXR 1 0.03% CMK/IspE 1 0.03% MDS/IspF 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 327 19 BAHD (132) View species results
Phenylpropanoid pathway 235 11 POD (103) View species results
Alkaloid pathway 231 23 GES (59) View species results
Flavonoid pathway 103 10 UFGT (60) View species results
Rosmarinic acid pathway 83 7 C4H (32) View species results
Steroid pathway 82 12 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1082 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
cinnamomum_camphora_GWHPBGXC023674 Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
cinnamomum_camphora_GWHPBGXC023675 Terpenoid UGT low borderline UGT__00075__sp_Q7Y232_U73B4_ARATH
cinnamomum_camphora_GWHPBGXC024501 Terpenoid UGT low borderline UGT__00086__sp_Q9LFJ8_U78D2_ARATH
cinnamomum_camphora_GWHPBGXC024736 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
cinnamomum_camphora_GWHPBGXC024737 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
cinnamomum_camphora_GWHPBGXC025572 Terpenoid UGT medium pass UGT__00017__sp_A0A224AKZ9_708G2_CITUN
cinnamomum_camphora_GWHPBGXC025573 Terpenoid UGT medium pass UGT__00017__sp_A0A224AKZ9_708G2_CITUN
cinnamomum_camphora_GWHPBGXC027189 Terpenoid UGT medium pass UGT__00018__sp_A0A224AM54_708G1_CITJP
cinnamomum_camphora_GWHPBGXC027792 Terpenoid UGT medium pass UGT__00098__sp_Q9LTH2_U76E2_ARATH
cinnamomum_camphora_GWHPBGXC027832 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
cinnamomum_camphora_GWHPBGXC027833 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
cinnamomum_camphora_GWHPBGXC028233 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH