Cinnamomum camphora (cinnamomum_camphora)
/
Imported from atlas release summary for Cinnamomum camphora.
1061
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1061
Candidate Genes
C4H
6.15%
BAHD
6.11%
C3'H/CYP98A
5.17%
POD
4.29%
IFS
3.51%
4CL
3.24%
CYP76
3.21%
TPS
3.11%
Other Families
65.2%
More Families (96)
GES
89
3.01%
UGT
88
2.97%
NMT
78
2.64%
CAD
77
2.6%
CAS
76
2.57%
7DLGT
75
2.53%
T3O
74
2.5%
UFGT
70
2.36%
DWF4/CYP90B1
70
2.36%
F3H
60
2.03%
F3'H/CYP75B
53
1.79%
STR
51
1.72%
CODM/T6ODM
46
1.55%
T16H
41
1.39%
SMT1/SMT2/SMT3
41
1.39%
CYP71
41
1.39%
BR6OX2/CYP85A2
38
1.28%
H6H
34
1.15%
COMT
32
1.08%
HCT
30
1.01%
CYP90D1
27
0.91%
G8O/G8H
25
0.84%
FNS
25
0.84%
LAC
25
0.84%
PYKS
24
0.81%
TRI/TRII
24
0.81%
IO
24
0.81%
IFR
24
0.81%
CSE
24
0.81%
F5H/CYP84A
24
0.81%
7DLH
23
0.78%
RAS
23
0.78%
GS
21
0.71%
CPD/CYP90A1
21
0.71%
PMT
20
0.68%
PAL
18
0.61%
SLS
17
0.57%
F3'5'H/CYP75A
17
0.57%
COR
15
0.51%
SGD
15
0.51%
CYP719
15
0.51%
BR6OX1/CYP85A1
14
0.47%
AACT
14
0.47%
TYDC_DDC
13
0.44%
ANS/LDOX
13
0.44%
CYP51G1
13
0.44%
NCS
12
0.41%
CNMT
12
0.41%
CCR
12
0.41%
CPR
12
0.41%
16OMT
11
0.37%
BBE
11
0.37%
ANR
11
0.37%
GGPPS
10
0.34%
MPO
9
0.3%
8HGO
9
0.3%
TAT
8
0.27%
ROT3/CYP90C1
8
0.27%
XMT_MXMT_DXMT
7
0.24%
SQS/FDFT1
7
0.24%
MVD
7
0.24%
CHI
6
0.2%
DFR
6
0.2%
CCoAOMT
6
0.2%
DET2
6
0.2%
DXS
6
0.2%
FPPS
6
0.2%
LAMT
5
0.17%
HPPR
5
0.17%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
CYP80B1
3
0.1%
ISY
3
0.1%
6OMT_4OMT_SOMT
3
0.1%
DWF1
3
0.1%
IDI
3
0.1%
HDR/IspH
3
0.1%
MVK
3
0.1%
MCT/IspD
3
0.1%
FLS
2
0.07%
CPI1
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
HMGR
2
0.07%
HDS/IspG
2
0.07%
HMGS
2
0.07%
TDC
1
0.03%
ODC
1
0.03%
ADC
1
0.03%
CHS
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
DXR
1
0.03%
CMK/IspE
1
0.03%
MDS/IspF
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 327 | 19 | BAHD (132) | View species results |
| Phenylpropanoid pathway | 235 | 11 | POD (103) | View species results |
| Alkaloid pathway | 231 | 23 | GES (59) | View species results |
| Flavonoid pathway | 103 | 10 | UFGT (60) | View species results |
| Rosmarinic acid pathway | 83 | 7 | C4H (32) | View species results |
| Steroid pathway | 82 | 12 | CAS (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1082 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 234 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| cinnamomum_camphora_GWHPBGXC021561 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| cinnamomum_camphora_GWHPBGXC021665 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| cinnamomum_camphora_GWHPBGXC021676 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| cinnamomum_camphora_GWHPBGXC021677 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| cinnamomum_camphora_GWHPBGXC021748 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| cinnamomum_camphora_GWHPBGXC022058 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| cinnamomum_camphora_GWHPBGXC022454 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| cinnamomum_camphora_GWHPBGXC022869 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| cinnamomum_camphora_GWHPBGXC022879 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| cinnamomum_camphora_GWHPBGXC023081 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| cinnamomum_camphora_GWHPBGXC023093 | Terpenoid | BAHD | low | borderline | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| cinnamomum_camphora_GWHPBGXC023124 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| cinnamomum_camphora_GWHPBGXC023129 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| cinnamomum_camphora_GWHPBGXC023471 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| cinnamomum_camphora_GWHPBGXC023472 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| cinnamomum_camphora_GWHPBGXC023590 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| cinnamomum_camphora_GWHPBGXC023591 | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| cinnamomum_camphora_GWHPBGXC023749 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| cinnamomum_camphora_GWHPBGXC023965 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| cinnamomum_camphora_GWHPBGXC024102 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| cinnamomum_camphora_GWHPBGXC024333 | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| cinnamomum_camphora_GWHPBGXC024796 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| cinnamomum_camphora_GWHPBGXC024797 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| cinnamomum_camphora_GWHPBGXC024801 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| cinnamomum_camphora_GWHPBGXC024802 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| cinnamomum_camphora_GWHPBGXC024804 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| cinnamomum_camphora_GWHPBGXC024854 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| cinnamomum_camphora_GWHPBGXC024855 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| cinnamomum_camphora_GWHPBGXC024856 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| cinnamomum_camphora_GWHPBGXC024915 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| cinnamomum_camphora_GWHPBGXC025313 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| cinnamomum_camphora_GWHPBGXC025329 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| cinnamomum_camphora_GWHPBGXC025687 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| cinnamomum_camphora_GWHPBGXC025905 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| cinnamomum_camphora_GWHPBGXC025908 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| cinnamomum_camphora_GWHPBGXC026458 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| cinnamomum_camphora_GWHPBGXC026561 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| cinnamomum_camphora_GWHPBGXC026676 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| cinnamomum_camphora_GWHPBGXC027074 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| cinnamomum_camphora_GWHPBGXC027193 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| cinnamomum_camphora_GWHPBGXC027650 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| cinnamomum_camphora_GWHPBGXC027654 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| cinnamomum_camphora_GWHPBGXC027656 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| cinnamomum_camphora_GWHPBGXC027841 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| cinnamomum_camphora_GWHPBGXC028207 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| cinnamomum_camphora_GWHPBGXC010424 | Terpenoid | CMK/IspE | high | pass | CMK_IspE__00001__sp_O81014_ISPE_ARATH |
| cinnamomum_camphora_GWHPBGXC001024 | Terpenoid | CYP71 | low | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| cinnamomum_camphora_GWHPBGXC001092 | Terpenoid | CYP71 | medium | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| cinnamomum_camphora_GWHPBGXC001094 | Terpenoid | CYP71 | low | borderline | CYP71__00002__sp_W8JDE2_C71Y1_CATRO |
| cinnamomum_camphora_GWHPBGXC001927 | Terpenoid | CYP71 | low | borderline | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |