Cissus rotundifolia (cissus_rotundifolia)
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Imported from atlas release summary for Cissus rotundifolia.
1646
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1646
Candidate Genes
C4H
6.8%
C3'H/CYP98A
5.69%
BAHD
5.67%
CYP76
4.46%
UGT
4.02%
IFS
3.69%
4CL
3.19%
7DLGT
3.02%
Other Families
63.45%
More Families (97)
POD
128
3.02%
T3O
115
2.72%
F3H
111
2.62%
UFGT
106
2.5%
TPS
104
2.46%
DWF4/CYP90B1
95
2.24%
GES
88
2.08%
CAS
88
2.08%
F3'H/CYP75B
87
2.06%
CAD
84
1.98%
NMT
82
1.94%
BR6OX2/CYP85A2
80
1.89%
STR
63
1.49%
CODM/T6ODM
62
1.46%
HCT
60
1.42%
H6H
54
1.28%
LAC
54
1.28%
TRI/TRII
51
1.2%
SMT1/SMT2/SMT3
51
1.2%
G8O/G8H
48
1.13%
TAT
44
1.04%
COMT
43
1.02%
T16H
41
0.97%
IO
40
0.94%
RAS
40
0.94%
16OMT
34
0.8%
FNS
34
0.8%
IFR
33
0.78%
CSE
33
0.78%
CPD/CYP90A1
33
0.78%
CYP71
31
0.73%
PYKS
30
0.71%
PAL
30
0.71%
GS
29
0.69%
F5H/CYP84A
29
0.69%
7DLH
28
0.66%
F3'5'H/CYP75A
27
0.64%
ANR
26
0.61%
CCR
25
0.59%
PMT
23
0.54%
LAMT
23
0.54%
CYP90D1
23
0.54%
CYP80B1
22
0.52%
SGD
22
0.52%
COR
22
0.52%
NCS
21
0.5%
SLS
18
0.43%
DFR
17
0.4%
8HGO
15
0.35%
ROT3/CYP90C1
14
0.33%
ANS/LDOX
11
0.26%
HPPR
11
0.26%
BR6OX1/CYP85A1
11
0.26%
CYP719
10
0.24%
BBE
9
0.21%
TYDC_DDC
9
0.21%
CYP80F1
9
0.21%
PMK
9
0.21%
MPO
7
0.17%
ISY
7
0.17%
CYP51G1
7
0.17%
SQS/FDFT1
7
0.17%
HMGS
7
0.17%
GGPPS
7
0.17%
CCoAOMT
6
0.14%
DET2
6
0.14%
AACT
6
0.14%
CNMT
5
0.12%
TDC
5
0.12%
CHS
5
0.12%
FPPS
5
0.12%
MVK
5
0.12%
ODC
4
0.09%
6OMT_4OMT_SOMT
4
0.09%
CHI
4
0.09%
CPR
4
0.09%
SMO1/SMO2
4
0.09%
SQE
4
0.09%
MVD
4
0.09%
MCT/IspD
4
0.09%
DXS
4
0.09%
ADC
3
0.07%
HYD1
3
0.07%
HMGR
3
0.07%
XMT_MXMT_DXMT
2
0.05%
DWF7
2
0.05%
HDR/IspH
2
0.05%
FLS
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
FK
1
0.02%
CMK/IspE
1
0.02%
MDS/IspF
1
0.02%
DXR
1
0.02%
IDI
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 536 | 19 | BAHD (186) | View species results |
| Alkaloid pathway | 362 | 24 | GES (74) | View species results |
| Phenylpropanoid pathway | 316 | 12 | POD (115) | View species results |
| Flavonoid pathway | 168 | 13 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 146 | 7 | C4H (46) | View species results |
| Steroid pathway | 118 | 12 | CAS (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1642 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 340 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| cissus_rotundifolia_CRGY0201838.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0206127.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0206888.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0209457.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0209460.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0209464.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0211898.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0218099.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0218106.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0218114.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0218551.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0218644.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| cissus_rotundifolia_CRGY0218647.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| cissus_rotundifolia_CRGY0218649.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| cissus_rotundifolia_CRGY0218651.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| cissus_rotundifolia_CRGY0222039.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0223380.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0223400.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| cissus_rotundifolia_CRGY0224556.1 | Alkaloid | NCS | medium | pass | NCS__00005__sp_Q67A25_NCS_THLFG |
| cissus_rotundifolia_CRGY0228671.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| cissus_rotundifolia_CRGY0230411.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |