PlantSME Plant secondary metabolism enzyme database

Cleistogenes songorica (cleistogenes_songorica)

Imported from atlas release summary for Cleistogenes songorica.

2762
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 755 19 UGT (273) View species results
Phenylpropanoid pathway 660 11 POD (354) View species results
Alkaloid pathway 585 24 7DLGT (137) View species results
Flavonoid pathway 385 12 UFGT (246) View species results
Rosmarinic acid pathway 234 7 C4H (105) View species results
Steroid pathway 143 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2652 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 520 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
CsonA1G0011870.1 Alkaloid 8HGO low borderline
CsonA1G0016970.1 Alkaloid 8HGO medium borderline
CsonA1G0031560.1 Alkaloid 8HGO medium borderline
CsonA1G0042200.1 Alkaloid 8HGO medium borderline
CsonA4G0026660.1 Alkaloid 8HGO low borderline
CsonA4G0029790.1 Alkaloid 8HGO low borderline
CsonA4G0034340.1 Alkaloid 8HGO medium borderline
CsonA4G0034370.1 Alkaloid 8HGO medium borderline
CsonA4G0034380.1 Alkaloid 8HGO medium borderline
CsonA7G0020410.1 Alkaloid 8HGO medium borderline
CsonA8G0004530.1 Alkaloid 8HGO medium borderline
CsonA9G0008860.1 Alkaloid 8HGO medium borderline
CsonB1G0009940.1 Alkaloid 8HGO low borderline
CsonB1G0027710.1 Alkaloid 8HGO medium pass
CsonB1G0038340.1 Alkaloid 8HGO medium borderline
CsonB4G0029910.1 Alkaloid 8HGO medium borderline
CsonB4G0029920.1 Alkaloid 8HGO medium borderline
CsonB8G0008940.1 Alkaloid 8HGO medium borderline
CsonB9G0007260.1 Alkaloid 8HGO medium pass
CsonB9G0007270.1 Alkaloid 8HGO medium borderline