PlantSME Plant secondary metabolism enzyme database

Cleistogenes songorica (cleistogenes_songorica)

Imported from atlas release summary for Cleistogenes songorica.

2762
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 755 19 UGT (273) View species results
Phenylpropanoid pathway 660 11 POD (354) View species results
Alkaloid pathway 585 24 7DLGT (137) View species results
Flavonoid pathway 385 12 UFGT (246) View species results
Rosmarinic acid pathway 234 7 C4H (105) View species results
Steroid pathway 143 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2652 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 520 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
CsonA1G0007660.1 Alkaloid PMT medium pass
CsonA1G0008160.1 Alkaloid PMT medium borderline
CsonA1G0011360.1 Alkaloid PMT medium pass
CsonA1G0017560.1 Alkaloid PMT medium pass
CsonA2G0003010.1 Alkaloid PMT medium pass
CsonA2G0020820.1 Alkaloid PMT medium pass
CsonA2G0020830.1 Alkaloid PMT medium pass
CsonA2G0025630.1 Alkaloid PMT medium pass
CsonA2G0026110.1 Alkaloid PMT medium pass
CsonA3G0003780.1 Alkaloid PMT low borderline
CsonA3G0003800.1 Alkaloid PMT low borderline
CsonA3G0018990.1 Alkaloid PMT medium pass
CsonA3G0021730.1 Alkaloid PMT medium pass
CsonA3G0022740.1 Alkaloid PMT low borderline
CsonA3G0026810.1 Alkaloid PMT medium borderline
CsonA3G0028840.1 Alkaloid PMT medium pass
CsonA3G0028850.1 Alkaloid PMT medium pass
CsonA3G0035170.1 Alkaloid PMT medium pass
CsonA4G0022260.1 Alkaloid PMT medium pass
CsonA5G0005960.1 Alkaloid PMT low borderline
CsonA5G0005990.1 Alkaloid PMT low borderline
CsonA5G0022690.1 Alkaloid PMT medium pass
CsonA7G0003340.1 Alkaloid PMT low borderline
CsonA7G0015360.1 Alkaloid PMT medium pass
CsonA7G0018020.1 Alkaloid PMT low borderline
CsonA7G0018180.1 Alkaloid PMT medium pass
CsonA7G0020530.1 Alkaloid PMT medium pass
CsonA7G0020540.1 Alkaloid PMT medium pass
CsonA7G0021580.1 Alkaloid PMT medium pass
CsonA8G0012920.1 Alkaloid PMT medium borderline
CsonA8G0018570.1 Alkaloid PMT low borderline
CsonA9G0002660.1 Alkaloid PMT low borderline
CsonA9G0002680.1 Alkaloid PMT low borderline
CsonB1G0013760.1 Alkaloid PMT medium borderline
CsonB1G0037090.1 Alkaloid PMT low borderline
CsonB2G0005910.1 Alkaloid PMT low borderline
CsonB2G0018600.1 Alkaloid PMT medium pass
CsonB2G0018610.1 Alkaloid PMT medium pass
CsonB2G0027070.1 Alkaloid PMT medium pass
CsonB2G0027550.1 Alkaloid PMT medium pass
CsonB3G0004810.1 Alkaloid PMT low borderline
CsonB3G0004820.1 Alkaloid PMT low borderline
CsonB3G0022160.1 Alkaloid PMT low borderline
CsonB3G0022170.1 Alkaloid PMT medium pass
CsonB3G0027270.1 Alkaloid PMT medium borderline
CsonB3G0029500.1 Alkaloid PMT medium pass
CsonB3G0029510.1 Alkaloid PMT medium pass
CsonB3G0035720.1 Alkaloid PMT medium pass
CsonB4G0020810.1 Alkaloid PMT medium pass
CsonB4G0029950.1 Alkaloid PMT low borderline