PlantSME Plant secondary metabolism enzyme database

Cleistogenes songorica (cleistogenes_songorica)

Imported from atlas release summary for Cleistogenes songorica.

3261
Candidate Protein Records
2762
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 755 19 UGT (273) View species results
Phenylpropanoid pathway 660 11 POD (354) View species results
Alkaloid pathway 585 24 7DLGT (137) View species results
Flavonoid pathway 385 12 UFGT (246) View species results
Rosmarinic acid pathway 234 7 C4H (105) View species results
Steroid pathway 143 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2652 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 520 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
CsonB3G0022170.1 Alkaloid PMT medium pass
CsonB3G0027270.1 Alkaloid PMT medium borderline
CsonB3G0029500.1 Alkaloid PMT medium pass
CsonB3G0029510.1 Alkaloid PMT medium pass
CsonB3G0035720.1 Alkaloid PMT medium pass
CsonB4G0020810.1 Alkaloid PMT medium pass
CsonB4G0029950.1 Alkaloid PMT low borderline
CsonB5G0002410.1 Alkaloid PMT medium pass
CsonB5G0011610.1 Alkaloid PMT low borderline
CsonB5G0024640.1 Alkaloid PMT medium pass
CsonB6G0007290.1 Alkaloid PMT low borderline
CsonB7G0005230.1 Alkaloid PMT medium pass
CsonB7G0005460.1 Alkaloid PMT medium pass
CsonB7G0007880.1 Alkaloid PMT medium pass
CsonB7G0020840.1 Alkaloid PMT low borderline
CsonB8G0004540.1 Alkaloid PMT low borderline
CsonB8G0007740.1 Alkaloid PMT medium pass
CsonB8G0014750.1 Alkaloid PMT medium pass
CsonB8G0018110.1 Alkaloid PMT medium borderline
CsonB8G0018580.1 Alkaloid PMT medium pass
CsonB9G0013250.1 Alkaloid PMT low borderline
CsonA1G0016710.1 Alkaloid PYKS low borderline
CsonA1G0020080.1 Alkaloid PYKS low borderline
CsonA1G0022350.1 Alkaloid PYKS low borderline
CsonA1G0022950.1 Alkaloid PYKS high pass
CsonA1G0036950.1 Alkaloid PYKS low borderline
CsonA1G0041990.1 Alkaloid PYKS low borderline
CsonA2G0024180.1 Alkaloid PYKS low borderline
CsonA3G0007630.1 Alkaloid PYKS low borderline
CsonA3G0007640.1 Alkaloid PYKS low borderline
CsonA3G0007650.1 Alkaloid PYKS low borderline
CsonA3G0007660.1 Alkaloid PYKS low borderline
CsonA3G0011580.1 Alkaloid PYKS low borderline
CsonA3G0019690.1 Alkaloid PYKS low borderline
CsonA3G0028980.1 Alkaloid PYKS low borderline
CsonA4G0012870.1 Alkaloid PYKS high pass
CsonA4G0012880.1 Alkaloid PYKS high pass
CsonA4G0019570.1 Alkaloid PYKS low borderline
CsonA4G0032700.1 Alkaloid PYKS low borderline
CsonA4G0033800.1 Alkaloid PYKS low borderline
CsonA5G0003810.1 Alkaloid PYKS low borderline
CsonA7G0001450.1 Alkaloid PYKS low borderline
CsonA7G0001830.1 Alkaloid PYKS low borderline
CsonA7G0014760.1 Alkaloid PYKS high pass
CsonA8G0010180.1 Alkaloid PYKS low borderline
CsonA8G0012810.1 Alkaloid PYKS medium pass
CsonA9G0003720.1 Alkaloid PYKS low borderline
CsonA9G0005650.1 Alkaloid PYKS low borderline
CsonA9G0006290.1 Alkaloid PYKS high pass
CsonA9G0006300.1 Alkaloid PYKS high pass