Coix lacryma-jobi (coix_lacryma_jobi)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.64% Alkaloid pathway 24.55% Phenylpropanoid pathway 17.56% Flavonoid pathway 12.59% Steroid pathway 8.25% Rosmarinic acid pathway 7.41%

Family Distribution

2375 Candidate Genes

BAHD 6.09% C4H 5.99% C3'H/CYP98A 4.82% POD 4.06% 4CL 3.9% UGT 3.69% CYP76 3.62% 7DLGT 3.38%

Other Families 64.45%

More Families (96)

UFGT 208 3.3% T3O 177 2.81% IFS 171 2.71% NMT 166 2.63% F3'H/CYP75B 142 2.25% DWF4/CYP90B1 127 2.01% STR 126 2.0% CAS 125 1.98% TPS 125 1.98% F3H 123 1.95% SMT1/SMT2/SMT3 119 1.89% CAD 116 1.84% BR6OX2/CYP85A2 116 1.84% GES 97 1.54% G8O/G8H 90 1.43% SGD 84 1.33% CYP71 79 1.25% CCR 69 1.09% CODM/T6ODM 67 1.06% FNS 67 1.06% COR 66 1.05% H6H 65 1.03% SLS 58 0.92% IFR 57 0.9% F5H/CYP84A 55 0.87% TRI/TRII 54 0.86% PAL 54 0.86% PMT 53 0.84% RAS 52 0.82% PYKS 50 0.79% T16H 48 0.76% HCT 48 0.76% LAC 48 0.76% CSE 48 0.76% ANR 46 0.73% DFR 45 0.71% NCS 40 0.63% GS 38 0.6% COMT 37 0.59% 8HGO 36 0.57% CNMT 36 0.57% CYP90D1 36 0.57% CYP51G1 34 0.54% CPD/CYP90A1 32 0.51% BR6OX1/CYP85A1 31 0.49% 16OMT 29 0.46% IO 29 0.46% ANS/LDOX 28 0.44% F3'5'H/CYP75A 26 0.41% CHS 25 0.4% BBE 21 0.33% TAT 20 0.32% MPO 19 0.3% CYP80B1 19 0.3% MVK 18 0.29% AACT 17 0.27% TYDC_DDC 16 0.25% CPR 15 0.24% HPPR 15 0.24% FLS 14 0.22% SQS/FDFT1 14 0.22% CYP719 13 0.21% ROT3/CYP90C1 13 0.21% 7DLH 12 0.19% SMO1/SMO2 11 0.17% FPPS 11 0.17% XMT_MXMT_DXMT 8 0.13% CCoAOMT 8 0.13% MVD 8 0.13% GGPPS 8 0.13% DWF1 7 0.11% MCT/IspD 6 0.1% ODC 5 0.08% HMGS 5 0.08% PMK 5 0.08% HDR/IspH 5 0.08% LAMT 4 0.06% HYD1 4 0.06% HMGR 4 0.06% TDC 3 0.05% CYP80F1 3 0.05% 6OMT_4OMT_SOMT 3 0.05% DET2 3 0.05% DWF5 3 0.05% CPI1 3 0.05% DXS 3 0.05% IDI 3 0.05% ADC 2 0.03% ISY 2 0.03% CHI 2 0.03% SQE 2 0.03% FK 2 0.03% DWF7 2 0.03% CMK/IspE 2 0.03% DXR 2 0.03% MDS/IspF 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	704	17	BAHD (256)	View species results
Alkaloid pathway	583	23	7DLGT (77)	View species results
Phenylpropanoid pathway	417	11	POD (184)	View species results
Flavonoid pathway	299	13	UFGT (182)	View species results
Steroid pathway	196	16	CAS (87)	View species results
Rosmarinic acid pathway	176	7	C4H (67)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	2221	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	484	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAD

Gene	Pathway	Family	Confidence	Status	Best Target
coix_lacryma-jobi_GWHPAAYR056013	Phenylpropanoid	CAD	low	borderline	CAD__00012__sp_Q02972_CADH8_ARATH
coix_lacryma-jobi_GWHPAAYR061997	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR061999	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR062000	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR062001	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR062004	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR062005	Phenylpropanoid	CAD	low	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR062009	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR062088	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
coix_lacryma-jobi_GWHPAAYR062089	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
coix_lacryma-jobi_GWHPAAYR062272	Phenylpropanoid	CAD	medium	pass	CAD__00013__sp_Q0JA75_CADH7_ORYSJ
coix_lacryma-jobi_GWHPAAYR062286	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
coix_lacryma-jobi_GWHPAAYR066219	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
coix_lacryma-jobi_GWHPAAYR067856	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
coix_lacryma-jobi_GWHPAAYR069388	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
coix_lacryma-jobi_GWHPAAYR069389	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR