PlantSME Plant secondary metabolism enzyme database

Coriaria nepalensis (coriaria_nepalensis)

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Imported from atlas release summary for Coriaria nepalensis.

3640
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.76% Phenylpropanoid pathway 22.86% Alkaloid pathway 20.93% Flavonoid pathway 11.9% Rosmarinic acid pathway 7.77% Steroid pathway 7.77%
Family Distribution
BAHD 6.64% C3'H/CYP98A 5.61% C4H 5.57% POD 4.36% 4CL 4.15% CYP76 3.62% IFS 3.54% UGT 3.44%
Other Families 63.07%
More Families (97)
NMT 279 3.33% 7DLGT 273 3.26% UFGT 269 3.21% T3O 248 2.96% F3H 209 2.49% STR 184 2.2% DWF4/CYP90B1 171 2.04% F3'H/CYP75B 163 1.95% SMT1/SMT2/SMT3 162 1.93% LAC 133 1.59% CAD 129 1.54% BR6OX2/CYP85A2 128 1.53% CODM/T6ODM 125 1.49% CYP71 120 1.43% CAS 116 1.38% IFR 103 1.23% CSE 103 1.23% TRI/TRII 96 1.15% GS 87 1.04% H6H 86 1.03% IO 84 1.0% RAS 82 0.98% PYKS 76 0.91% T16H 73 0.87% HCT 72 0.86% PMT 70 0.84% SGD 65 0.78% TPS 61 0.73% GES 59 0.7% CYP90D1 59 0.7% COMT 56 0.67% BR6OX1/CYP85A1 55 0.66% G8O/G8H 54 0.64% 7DLH 53 0.63% PAL 51 0.61% TAT 51 0.61% BBE 50 0.6% ANR 48 0.57% FNS 47 0.56% CCR 45 0.54% CYP51G1 45 0.54% F3'5'H/CYP75A 43 0.51% CNMT 41 0.49% F5H/CYP84A 40 0.48% SLS 37 0.44% NCS 36 0.43% CPD/CYP90A1 36 0.43% DFR 30 0.36% 16OMT 29 0.35% CPR 27 0.32% FPPS 25 0.3% 8HGO 24 0.29% COR 24 0.29% GGPPS 22 0.26% CYP719 20 0.24% CHS 20 0.24% DXS 19 0.23% SQS/FDFT1 18 0.21% SQE 17 0.2% DWF1 17 0.2% DET2 16 0.19% MVK 16 0.19% CHI 15 0.18% CYP80B1 14 0.17% SMO1/SMO2 14 0.17% TYDC_DDC 13 0.16% TDC 13 0.16% ROT3/CYP90C1 13 0.16% DXR 13 0.16% AACT 13 0.16% ANS/LDOX 12 0.14% CCoAOMT 12 0.14% MVD 12 0.14% LAMT 11 0.13% HMGR 11 0.13% MPO 10 0.12% HPPR 10 0.12% MCT/IspD 10 0.12% ISY 9 0.11% ADC 8 0.1% HMGS 8 0.1% HDS/IspG 7 0.08% XMT_MXMT_DXMT 6 0.07% HYD1 6 0.07% DWF7 6 0.07% PMK 6 0.07% IDI 5 0.06% FK 4 0.05% DWF5 4 0.05% MDS/IspF 4 0.05% HDR/IspH 4 0.05% CMK/IspE 4 0.05% CPI1 3 0.04% CYP80F1 2 0.02% ODC 2 0.02% FLS 2 0.02% 6OMT_4OMT_SOMT 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1047 19 BAHD (449) View species results
Phenylpropanoid pathway 832 12 POD (355) View species results
Alkaloid pathway 762 22 NMT (153) View species results
Flavonoid pathway 433 11 UFGT (253) View species results
Rosmarinic acid pathway 283 7 C4H (88) View species results
Steroid pathway 283 12 SMT1/SMT2/SMT3 (106) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2995 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 710 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HDR/IspH
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Gene Pathway Family Confidence Status Best Target
coriaria_nepalensis_Conep08aG0121000.1 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
coriaria_nepalensis_Conep08bG0119700.1 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
coriaria_nepalensis_Conep12aG0116600.1 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
coriaria_nepalensis_Conep12bG0114700.1 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH