PlantSME Plant secondary metabolism enzyme database

Cucumis melo (cucumis_melo)

Imported from atlas release summary for Cucumis melo.

1224
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.27% Alkaloid pathway 21.57% Phenylpropanoid pathway 19.44% Flavonoid pathway 13.73% Rosmarinic acid pathway 10.54% Steroid pathway 6.45%
Family Distribution
C4H 6.95% C3'H/CYP98A 6.72% BAHD 4.91% CYP76 4.85% IFS 4.45% 4CL 3.71% UGT 3.71% POD 3.51%
Other Families 61.2%
More Families (96)
UFGT 104 3.48% 7DLGT 103 3.44% T3O 97 3.24% DWF4/CYP90B1 77 2.57% NMT 63 2.11% F3H 59 1.97% F3'H/CYP75B 58 1.94% PAL 45 1.5% BR6OX2/CYP85A2 45 1.5% STR 44 1.47% CAS 44 1.47% SMT1/SMT2/SMT3 44 1.47% CAD 43 1.44% TPS 35 1.17% CODM/T6ODM 34 1.14% H6H 33 1.1% T16H 33 1.1% TRI/TRII 33 1.1% GES 31 1.04% IFR 30 1.0% G8O/G8H 29 0.97% F3'5'H/CYP75A 26 0.87% HCT 26 0.87% CSE 25 0.84% CYP71 25 0.84% SGD 24 0.8% COMT 24 0.8% IO 23 0.77% BBE 23 0.77% LAC 23 0.77% SLS 22 0.74% F5H/CYP84A 21 0.7% RAS 21 0.7% TAT 21 0.7% CYP51G1 21 0.7% GS 20 0.67% CYP90D1 20 0.67% FNS 19 0.64% PYKS 18 0.6% 16OMT 18 0.6% PMT 18 0.6% CYP719 17 0.57% CYP80B1 16 0.53% ANR 15 0.5% CCR 15 0.5% CPD/CYP90A1 15 0.5% NCS 14 0.47% 8HGO 14 0.47% BR6OX1/CYP85A1 14 0.47% ROT3/CYP90C1 13 0.43% COR 12 0.4% CNMT 11 0.37% AACT 11 0.37% 7DLH 10 0.33% LAMT 9 0.3% DFR 9 0.3% HPPR 9 0.3% ANS/LDOX 8 0.27% DXS 7 0.23% MPO 6 0.2% FPPS 6 0.2% CPR 5 0.17% SQS/FDFT1 5 0.17% CHS 4 0.13% DET2 4 0.13% MVD 4 0.13% MVK 4 0.13% GGPPS 4 0.13% TYDC_DDC 3 0.1% CHI 3 0.1% CCoAOMT 3 0.1% SQE 3 0.1% HMGR 3 0.1% XMT_MXMT_DXMT 2 0.07% ISY 2 0.07% DWF1 2 0.07% HYD1 2 0.07% SMO1/SMO2 2 0.07% DWF7 2 0.07% HDR/IspH 2 0.07% IDI 2 0.07% PMK 2 0.07% MCT/IspD 2 0.07% 6OMT_4OMT_SOMT 1 0.03% ODC 1 0.03% CYP80F1 1 0.03% ADC 1 0.03% FLS 1 0.03% DWF5 1 0.03% FK 1 0.03% CPI1 1 0.03% CMK/IspE 1 0.03% DXR 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 346 19 BAHD (112) View species results
Alkaloid pathway 264 21 7DLGT (62) View species results
Phenylpropanoid pathway 238 12 POD (101) View species results
Flavonoid pathway 168 11 UFGT (101) View species results
Rosmarinic acid pathway 129 7 C4H (56) View species results
Steroid pathway 79 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1270 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 194 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Cmel09G0019930.1 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Cmel10G0000060.1 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Cmel10G0013140.1 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH
Cmel11G0000710.1 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Cmel11G0003480.1 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Cmel11G0006490.1 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Cmel11G0007910.1 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
Cmel11G0018250.1 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Cmel11G0019950.1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Cmel11G0023840.1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Cmel11G0024120.1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Cmel12G0007510.1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Cmel12G0018320.1 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH