Cucurbita maxima (cucurbita_maxima)
Imported from atlas release summary for Cucurbita maxima.
1309
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1309
Candidate Genes
BAHD
6.09%
C4H
5.81%
C3'H/CYP98A
5.62%
4CL
4.82%
POD
4.23%
CYP76
3.83%
UGT
3.65%
IFS
3.62%
Other Families
62.33%
More Families (96)
7DLGT
111
3.43%
UFGT
109
3.37%
T3O
96
2.97%
F3H
91
2.81%
NMT
90
2.78%
DWF4/CYP90B1
75
2.32%
F3'H/CYP75B
60
1.85%
CODM/T6ODM
56
1.73%
STR
55
1.7%
BR6OX2/CYP85A2
53
1.64%
SMT1/SMT2/SMT3
46
1.42%
PAL
42
1.3%
H6H
39
1.21%
CAS
39
1.21%
IFR
38
1.17%
TPS
38
1.17%
CAD
37
1.14%
HCT
34
1.05%
LAC
33
1.02%
CYP71
32
0.99%
TRI/TRII
31
0.96%
GES
31
0.96%
CSE
31
0.96%
T16H
29
0.9%
PYKS
28
0.87%
G8O/G8H
27
0.83%
SLS
26
0.8%
CYP90D1
26
0.8%
SGD
25
0.77%
F3'5'H/CYP75A
25
0.77%
TAT
25
0.77%
GS
23
0.71%
PMT
22
0.68%
IO
22
0.68%
BBE
22
0.68%
RAS
21
0.65%
CCR
20
0.62%
F5H/CYP84A
19
0.59%
COMT
19
0.59%
CNMT
17
0.53%
NCS
16
0.49%
FNS
16
0.49%
BR6OX1/CYP85A1
15
0.46%
ANR
14
0.43%
CPD/CYP90A1
14
0.43%
ROT3/CYP90C1
14
0.43%
7DLH
13
0.4%
8HGO
13
0.4%
16OMT
13
0.4%
DFR
12
0.37%
CYP51G1
12
0.37%
ANS/LDOX
11
0.34%
LAMT
10
0.31%
AACT
10
0.31%
CHS
9
0.28%
CPR
9
0.28%
SQS/FDFT1
8
0.25%
CYP719
7
0.22%
MPO
7
0.22%
COR
7
0.22%
CCoAOMT
7
0.22%
SQE
7
0.22%
MVK
7
0.22%
FPPS
7
0.22%
HPPR
6
0.19%
HMGR
6
0.19%
DXS
6
0.19%
DET2
5
0.15%
MVD
5
0.15%
ISY
4
0.12%
TYDC_DDC
4
0.12%
CYP80B1
4
0.12%
DWF1
4
0.12%
SMO1/SMO2
4
0.12%
GGPPS
4
0.12%
PMK
4
0.12%
IDI
4
0.12%
CHI
3
0.09%
DWF7
3
0.09%
CPI1
3
0.09%
MCT/IspD
3
0.09%
HDR/IspH
3
0.09%
ADC
2
0.06%
ODC
2
0.06%
FK
2
0.06%
HDS/IspG
2
0.06%
MDS/IspF
2
0.06%
HMGS
2
0.06%
CMK/IspE
2
0.06%
TDC
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
FLS
1
0.03%
DWF5
1
0.03%
HYD1
1
0.03%
GPPS
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 385 | 19 | BAHD (142) | View species results |
| Phenylpropanoid pathway | 273 | 11 | POD (121) | View species results |
| Alkaloid pathway | 266 | 21 | 7DLGT (55) | View species results |
| Flavonoid pathway | 182 | 9 | UFGT (104) | View species results |
| Rosmarinic acid pathway | 116 | 7 | C4H (36) | View species results |
| Steroid pathway | 87 | 13 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1180 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 252 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cmax01G0007790.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax02G0004870.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax02G0010210.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax04G0023470.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax05G0006480.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax05G0013650.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax13G0007180.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax13G0011230.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax15G0006950.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax15G0013930.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax16G0011230.1 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cmax17G0003490.1 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cmax20G0009140.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cmax20G0009150.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cmax20G0009160.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cmax20G0009180.1 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |