PlantSME Plant secondary metabolism enzyme database

Cucurbita maxima (cucurbita_maxima)

Imported from atlas release summary for Cucurbita maxima.

1609
Candidate Protein Records
1309
Pathway-Level Records
3236
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 29.41% Phenylpropanoid pathway 20.86% Alkaloid pathway 20.32% Flavonoid pathway 13.9% Rosmarinic acid pathway 8.86% Steroid pathway 6.65%
Family Distribution
BAHD 6.09% C4H 5.81% C3'H/CYP98A 5.62% 4CL 4.82% POD 4.23% CYP76 3.83% UGT 3.65% IFS 3.62%
Other Families 62.33%
More Families (96)
7DLGT 111 3.43% UFGT 109 3.37% T3O 96 2.97% F3H 91 2.81% NMT 90 2.78% DWF4/CYP90B1 75 2.32% F3'H/CYP75B 60 1.85% CODM/T6ODM 56 1.73% STR 55 1.7% BR6OX2/CYP85A2 53 1.64% SMT1/SMT2/SMT3 46 1.42% PAL 42 1.3% H6H 39 1.21% CAS 39 1.21% IFR 38 1.17% TPS 38 1.17% CAD 37 1.14% HCT 34 1.05% LAC 33 1.02% CYP71 32 0.99% TRI/TRII 31 0.96% GES 31 0.96% CSE 31 0.96% T16H 29 0.9% PYKS 28 0.87% G8O/G8H 27 0.83% SLS 26 0.8% CYP90D1 26 0.8% SGD 25 0.77% F3'5'H/CYP75A 25 0.77% TAT 25 0.77% GS 23 0.71% PMT 22 0.68% IO 22 0.68% BBE 22 0.68% RAS 21 0.65% CCR 20 0.62% F5H/CYP84A 19 0.59% COMT 19 0.59% CNMT 17 0.53% NCS 16 0.49% FNS 16 0.49% BR6OX1/CYP85A1 15 0.46% ANR 14 0.43% CPD/CYP90A1 14 0.43% ROT3/CYP90C1 14 0.43% 7DLH 13 0.4% 8HGO 13 0.4% 16OMT 13 0.4% DFR 12 0.37% CYP51G1 12 0.37% ANS/LDOX 11 0.34% LAMT 10 0.31% AACT 10 0.31% CHS 9 0.28% CPR 9 0.28% SQS/FDFT1 8 0.25% CYP719 7 0.22% MPO 7 0.22% COR 7 0.22% CCoAOMT 7 0.22% SQE 7 0.22% MVK 7 0.22% FPPS 7 0.22% HPPR 6 0.19% HMGR 6 0.19% DXS 6 0.19% DET2 5 0.15% MVD 5 0.15% ISY 4 0.12% TYDC_DDC 4 0.12% CYP80B1 4 0.12% DWF1 4 0.12% SMO1/SMO2 4 0.12% GGPPS 4 0.12% PMK 4 0.12% IDI 4 0.12% CHI 3 0.09% DWF7 3 0.09% CPI1 3 0.09% MCT/IspD 3 0.09% HDR/IspH 3 0.09% ADC 2 0.06% ODC 2 0.06% FK 2 0.06% HDS/IspG 2 0.06% MDS/IspF 2 0.06% HMGS 2 0.06% CMK/IspE 2 0.06% TDC 1 0.03% 6OMT_4OMT_SOMT 1 0.03% FLS 1 0.03% DWF5 1 0.03% HYD1 1 0.03% GPPS 1 0.03% DXR 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 385 19 BAHD (142) View species results
Phenylpropanoid pathway 273 11 POD (121) View species results
Alkaloid pathway 266 21 7DLGT (55) View species results
Flavonoid pathway 182 9 UFGT (104) View species results
Rosmarinic acid pathway 116 7 C4H (36) View species results
Steroid pathway 87 13 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1180 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 252 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
Cmax04G0024430.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Cmax13G0005090.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Cmax18G0004930.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Cmax19G0001210.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH