Cucurbita moschata (cucurbita_moschata)
Imported from atlas release summary for Cucurbita moschata.
1470
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1470
Candidate Genes
C4H
6.59%
C3'H/CYP98A
6.37%
BAHD
5.59%
CYP76
4.33%
4CL
4.11%
POD
3.98%
IFS
3.63%
T3O
3.55%
Other Families
61.84%
More Families (97)
UGT
130
3.5%
7DLGT
121
3.25%
UFGT
117
3.15%
DWF4/CYP90B1
92
2.47%
NMT
90
2.42%
F3'H/CYP75B
84
2.26%
F3H
82
2.2%
BR6OX2/CYP85A2
81
2.18%
STR
57
1.53%
CAS
56
1.51%
CODM/T6ODM
53
1.43%
SMT1/SMT2/SMT3
50
1.34%
TPS
49
1.32%
PAL
48
1.29%
CAD
46
1.24%
CYP71
46
1.24%
GES
42
1.13%
TRI/TRII
38
1.02%
HCT
38
1.02%
H6H
36
0.97%
T16H
36
0.97%
IFR
35
0.94%
F3'5'H/CYP75A
33
0.89%
COMT
33
0.89%
LAC
32
0.86%
G8O/G8H
31
0.83%
CSE
31
0.83%
CYP90D1
30
0.81%
SLS
29
0.78%
SGD
28
0.75%
PYKS
28
0.75%
16OMT
28
0.75%
TAT
28
0.75%
IO
25
0.67%
F5H/CYP84A
25
0.67%
GS
23
0.62%
PMT
23
0.62%
CYP51G1
23
0.62%
BBE
22
0.59%
RAS
22
0.59%
FNS
20
0.54%
NCS
18
0.48%
CCR
17
0.46%
8HGO
16
0.43%
7DLH
15
0.4%
CNMT
14
0.38%
ANR
14
0.38%
ANS/LDOX
14
0.38%
BR6OX1/CYP85A1
13
0.35%
CPD/CYP90A1
13
0.35%
ROT3/CYP90C1
12
0.32%
DFR
11
0.3%
LAMT
9
0.24%
CHS
9
0.24%
CPR
9
0.24%
SQS/FDFT1
9
0.24%
AACT
9
0.24%
CYP719
8
0.22%
CCoAOMT
8
0.22%
FPPS
8
0.22%
MPO
7
0.19%
CYP80B1
7
0.19%
COR
7
0.19%
HPPR
7
0.19%
SQE
7
0.19%
DET2
6
0.16%
MVK
6
0.16%
MVD
5
0.13%
HMGR
5
0.13%
GGPPS
5
0.13%
DXS
5
0.13%
ISY
4
0.11%
SMO1/SMO2
4
0.11%
CMK/IspE
4
0.11%
MCT/IspD
4
0.11%
PMK
4
0.11%
IDI
4
0.11%
HDR/IspH
4
0.11%
TYDC_DDC
3
0.08%
CHI
3
0.08%
DWF1
3
0.08%
CPI1
3
0.08%
ADC
2
0.05%
XMT_MXMT_DXMT
2
0.05%
TDC
2
0.05%
ODC
2
0.05%
FLS
2
0.05%
DWF7
2
0.05%
FK
2
0.05%
HDS/IspG
2
0.05%
MDS/IspF
2
0.05%
HMGS
2
0.05%
DXR
2
0.05%
CYP80F1
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
DWF5
1
0.03%
HYD1
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 447 | 19 | BAHD (156) | View species results |
| Phenylpropanoid pathway | 308 | 11 | POD (137) | View species results |
| Alkaloid pathway | 291 | 23 | 7DLGT (54) | View species results |
| Flavonoid pathway | 184 | 9 | UFGT (111) | View species results |
| Rosmarinic acid pathway | 147 | 7 | C4H (58) | View species results |
| Steroid pathway | 93 | 11 | CAS (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1514 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 268 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cmos18G0001620.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0001640.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0001650.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0001660.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0001670.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0001690.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0001700.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0001750.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007290.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007320.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007330.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007370.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007390.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007400.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007410.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007440.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007470.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007500.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007510.1 | Alkaloid | T3O | medium | borderline |
| Cmos18G0007530.1 | Alkaloid | T3O | medium | borderline |
| Cmos19G0001440.1 | Alkaloid | T3O | medium | borderline |
| Cmos19G0001450.1 | Alkaloid | T3O | medium | borderline |
| Cmos19G0001470.1 | Alkaloid | T3O | medium | borderline |
| Cmos19G0004660.1 | Alkaloid | T3O | low | borderline |
| Cmos19G0006230.1 | Alkaloid | T3O | medium | pass |
| Cmos19G0010900.1 | Alkaloid | T3O | medium | pass |
| Cmos20G0003310.1 | Alkaloid | T3O | medium | borderline |
| Cmos20G0009850.1 | Alkaloid | T3O | medium | borderline |
| Cmos20G0009860.1 | Alkaloid | T3O | medium | borderline |
| Cmos20G0009880.1 | Alkaloid | T3O | medium | borderline |
| Cmos20G0009910.1 | Alkaloid | T3O | medium | borderline |
| Cmos20G0011280.1 | Alkaloid | T3O | medium | borderline |