Cucurbita moschata (cucurbita_moschata)
Imported from atlas release summary for Cucurbita moschata.
1741
Candidate Protein Records
1470
Pathway-Level Records
3719
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3719
Family-Level Calls
C4H
6.59%
C3'H/CYP98A
6.37%
BAHD
5.59%
CYP76
4.33%
4CL
4.11%
POD
3.98%
IFS
3.63%
T3O
3.55%
Other Families
61.84%
More Families (97)
UGT
130
3.5%
7DLGT
121
3.25%
UFGT
117
3.15%
DWF4/CYP90B1
92
2.47%
NMT
90
2.42%
F3'H/CYP75B
84
2.26%
F3H
82
2.2%
BR6OX2/CYP85A2
81
2.18%
STR
57
1.53%
CAS
56
1.51%
CODM/T6ODM
53
1.43%
SMT1/SMT2/SMT3
50
1.34%
TPS
49
1.32%
PAL
48
1.29%
CAD
46
1.24%
CYP71
46
1.24%
GES
42
1.13%
TRI/TRII
38
1.02%
HCT
38
1.02%
H6H
36
0.97%
T16H
36
0.97%
IFR
35
0.94%
F3'5'H/CYP75A
33
0.89%
COMT
33
0.89%
LAC
32
0.86%
G8O/G8H
31
0.83%
CSE
31
0.83%
CYP90D1
30
0.81%
SLS
29
0.78%
SGD
28
0.75%
PYKS
28
0.75%
16OMT
28
0.75%
TAT
28
0.75%
IO
25
0.67%
F5H/CYP84A
25
0.67%
GS
23
0.62%
PMT
23
0.62%
CYP51G1
23
0.62%
BBE
22
0.59%
RAS
22
0.59%
FNS
20
0.54%
NCS
18
0.48%
CCR
17
0.46%
8HGO
16
0.43%
7DLH
15
0.4%
CNMT
14
0.38%
ANR
14
0.38%
ANS/LDOX
14
0.38%
BR6OX1/CYP85A1
13
0.35%
CPD/CYP90A1
13
0.35%
ROT3/CYP90C1
12
0.32%
DFR
11
0.3%
LAMT
9
0.24%
CHS
9
0.24%
CPR
9
0.24%
SQS/FDFT1
9
0.24%
AACT
9
0.24%
CYP719
8
0.22%
CCoAOMT
8
0.22%
FPPS
8
0.22%
MPO
7
0.19%
CYP80B1
7
0.19%
COR
7
0.19%
HPPR
7
0.19%
SQE
7
0.19%
DET2
6
0.16%
MVK
6
0.16%
MVD
5
0.13%
HMGR
5
0.13%
GGPPS
5
0.13%
DXS
5
0.13%
ISY
4
0.11%
SMO1/SMO2
4
0.11%
CMK/IspE
4
0.11%
MCT/IspD
4
0.11%
PMK
4
0.11%
IDI
4
0.11%
HDR/IspH
4
0.11%
TYDC_DDC
3
0.08%
CHI
3
0.08%
DWF1
3
0.08%
CPI1
3
0.08%
ADC
2
0.05%
XMT_MXMT_DXMT
2
0.05%
TDC
2
0.05%
ODC
2
0.05%
FLS
2
0.05%
DWF7
2
0.05%
FK
2
0.05%
HDS/IspG
2
0.05%
MDS/IspF
2
0.05%
HMGS
2
0.05%
DXR
2
0.05%
CYP80F1
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
DWF5
1
0.03%
HYD1
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 447 | 19 | BAHD (156) | View species results |
| Phenylpropanoid pathway | 308 | 11 | POD (137) | View species results |
| Alkaloid pathway | 291 | 23 | 7DLGT (54) | View species results |
| Flavonoid pathway | 184 | 9 | UFGT (111) | View species results |
| Rosmarinic acid pathway | 147 | 7 | C4H (58) | View species results |
| Steroid pathway | 93 | 11 | CAS (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1514 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 268 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cmos05G0006990.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos06G0014210.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos06G0015540.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos07G0003840.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos08G0005640.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos08G0005650.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos08G0006750.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos09G0000620.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos09G0000690.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos09G0007860.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos10G0004320.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos11G0003950.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos11G0015520.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos11G0018130.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos13G0008250.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos14G0002160.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos14G0007970.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos14G0009670.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos14G0010570.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos14G0016290.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos14G0017380.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos15G0008030.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos15G0011550.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos15G0013480.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos16G0005980.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos16G0013150.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos17G0000770.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos17G0004450.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos17G0008870.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos18G0002000.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos18G0006350.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos19G0002210.1 | Rosmarinic Acid | 4CL | medium | pass |
| Cmos20G0008840.1 | Rosmarinic Acid | 4CL | low | borderline |
| Cmos01G0000320.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmos01G0000330.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmos01G0002260.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmos01G0002270.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmos01G0004060.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0006440.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0007640.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmos01G0010390.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0013330.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0018580.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0018620.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmos01G0018990.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0019310.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0019380.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0019390.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0019400.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmos01G0019410.1 | Rosmarinic Acid | C4H | low | borderline |