PlantSME Plant secondary metabolism enzyme database

Cuscuta australis (cuscuta_australis)

Imported from atlas release summary for Cuscuta australis.

664
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.72% Phenylpropanoid pathway 21.84% Alkaloid pathway 19.88% Flavonoid pathway 12.95% Rosmarinic acid pathway 8.43% Steroid pathway 6.17%
Family Distribution
BAHD 8.11% 4CL 5.66% C3'H/CYP98A 4.9% C4H 4.27% NMT 4.02% POD 3.9% UGT 3.71% UFGT 3.52%
Other Families 61.91%
More Families (92)
7DLGT 53 3.33% CYP76 50 3.14% IFS 46 2.89% T3O 43 2.7% STR 40 2.51% CAD 36 2.26% F3H 34 2.14% SMT1/SMT2/SMT3 34 2.14% DWF4/CYP90B1 32 2.01% CSE 27 1.7% PYKS 24 1.51% CODM/T6ODM 23 1.45% CYP71 23 1.45% BR6OX2/CYP85A2 22 1.38% GS 21 1.32% IFR 21 1.32% F3'H/CYP75B 20 1.26% TRI/TRII 19 1.19% H6H 19 1.19% RAS 19 1.19% HCT 18 1.13% LAC 16 1.01% CAS 15 0.94% BBE 13 0.82% PMT 12 0.75% FNS 11 0.69% F3'5'H/CYP75A 11 0.69% CPD/CYP90A1 11 0.69% SGD 10 0.63% 8HGO 10 0.63% ANR 10 0.63% CCR 10 0.63% IO 9 0.57% 7DLH 9 0.57% GES 9 0.57% PAL 9 0.57% TPS 9 0.57% G8O/G8H 8 0.5% T16H 8 0.5% SLS 8 0.5% COMT 8 0.5% TAT 8 0.5% CHS 7 0.44% CYP719 6 0.38% CNMT 6 0.38% TYDC_DDC 6 0.38% ANS/LDOX 6 0.38% CYP90D1 6 0.38% CYP51G1 6 0.38% LAMT 5 0.31% F5H/CYP84A 5 0.31% CPR 5 0.31% AACT 5 0.31% 16OMT 4 0.25% MPO 4 0.25% CCoAOMT 4 0.25% ROT3/CYP90C1 4 0.25% MVK 4 0.25% GGPPS 4 0.25% MCT/IspD 4 0.25% FPPS 4 0.25% TDC 3 0.19% DFR 3 0.19% CHI 3 0.19% SQS/FDFT1 3 0.19% HMGR 3 0.19% ADC 2 0.13% ISY 2 0.13% COR 2 0.13% CYP80B1 2 0.13% HPPR 2 0.13% SMO1/SMO2 2 0.13% CPI1 2 0.13% MVD 2 0.13% IDI 2 0.13% PMK 2 0.13% CMK/IspE 2 0.13% CYP80F1 1 0.06% ODC 1 0.06% FK 1 0.06% DWF1 1 0.06% DET2 1 0.06% DWF7 1 0.06% BR6OX1/CYP85A1 1 0.06% HYD1 1 0.06% SQE 1 0.06% DWF5 1 0.06% MDS/IspF 1 0.06% DXR 1 0.06% HMGS 1 0.06% HDS/IspG 1 0.06% HDR/IspH 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 204 18 BAHD (94) View species results
Phenylpropanoid pathway 145 11 POD (55) View species results
Alkaloid pathway 132 17 NMT (34) View species results
Flavonoid pathway 86 7 UFGT (51) View species results
Rosmarinic acid pathway 56 7 4CL (18) View species results
Steroid pathway 41 11 SMT1/SMT2/SMT3 (18) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 166 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
CausC008N0048920 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
CausC012N0063440 Phenylpropanoid CCR low borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
CausC016N0078960 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
CausC017N0082980 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
CausC019N0090410 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
CausC020N0093160 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
CausC024N0106990 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
CausC031N0122440 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
CausC035N0131080 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
CausC128N0191730 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH