PlantSME Plant secondary metabolism enzyme database

Cyanophora paradoxa (cyanophora_paradoxa)

Imported from atlas release summary for Cyanophora paradoxa.

140
Candidate Genes
80
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 37.86% Alkaloid pathway 21.43% Phenylpropanoid pathway 16.43% Steroid pathway 11.43% Rosmarinic acid pathway 10.0% Flavonoid pathway 2.86%
Family Distribution
BAHD 8.28% 4CL 6.67% STR 5.66% NMT 5.45% C3'H/CYP98A 4.44% IFR 4.24% C4H 3.64% POD 3.43%
Other Families 58.18%
More Families (72)
CPR 17 3.43% CYP71 16 3.23% IFS 15 3.03% GS 14 2.83% CNMT 12 2.42% T3O 12 2.42% DWF4/CYP90B1 10 2.02% CAS 10 2.02% TRI/TRII 9 1.82% SMT1/SMT2/SMT3 9 1.82% CSE 8 1.62% HMGR 8 1.62% CYP719 7 1.41% CAD 7 1.41% CYP76 7 1.41% F3'H/CYP75B 6 1.21% BR6OX2/CYP85A2 6 1.21% 8HGO 5 1.01% LAMT 5 1.01% FNS 4 0.81% ANR 4 0.81% CPD/CYP90A1 4 0.81% MVK 4 0.81% H6H 3 0.61% 7DLH 3 0.61% COR 3 0.61% DFR 3 0.61% F3H 3 0.61% CCR 3 0.61% COMT 3 0.61% HPPR 3 0.61% TAT 3 0.61% DET2 3 0.61% SQS/FDFT1 3 0.61% FPPS 3 0.61% IDI 3 0.61% MCT/IspD 3 0.61% T16H 2 0.4% CYP80B1 2 0.4% ODC 2 0.4% G8O/G8H 2 0.4% SLS 2 0.4% UFGT 2 0.4% CYP51G1 2 0.4% ROT3/CYP90C1 2 0.4% CYP90D1 2 0.4% AACT 2 0.4% DXR 2 0.4% HDS/IspG 2 0.4% CODM/T6ODM 1 0.2% NCS 1 0.2% 6OMT_4OMT_SOMT 1 0.2% PMT 1 0.2% 7DLGT 1 0.2% PYKS 1 0.2% IO 1 0.2% TDC 1 0.2% SGD 1 0.2% SQE 1 0.2% HYD1 1 0.2% FK 1 0.2% DWF5 1 0.2% CPI1 1 0.2% BR6OX1/CYP85A1 1 0.2% HDR/IspH 1 0.2% DXS 1 0.2% MVD 1 0.2% UGT 1 0.2% PMK 1 0.2% GGPPS 1 0.2% MDS/IspF 1 0.2% CMK/IspE 1 0.2%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 53 16 BAHD (24) View species results
Alkaloid pathway 30 9 GS (8) View species results
Phenylpropanoid pathway 23 5 POD (13) View species results
Steroid pathway 16 7 CAS (10) View species results
Rosmarinic acid pathway 14 4 CPR (8) View species results
Flavonoid pathway 4 2 4CL (2) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 21 142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 1 41 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status Best Target
Cpartig000002410036750.v1.176 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Cpartig000006400076560.v1.176 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Cpartig000008520096210.v1.176 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI