PlantSME Plant secondary metabolism enzyme database

Daemonorops jenkinsiana (daemonorops_jenkinsiana)

Imported from atlas release summary for Daemonorops jenkinsiana.

2588
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.31% Terpenoid pathway 24.23% Alkaloid pathway 23.18% Flavonoid pathway 10.82% Rosmarinic acid pathway 9.54% Steroid pathway 6.92%
Family Distribution
C4H 6.46% BAHD 6.01% C3'H/CYP98A 5.57% 4CL 4.2% POD 4.02% IFS 3.67% CYP76 3.46% T3O 3.36%
Other Families 63.25%
More Families (98)
NMT 206 3.21% DWF4/CYP90B1 179 2.79% UGT 161 2.51% F3H 157 2.44% CAD 133 2.07% F3'H/CYP75B 123 1.91% 7DLGT 104 1.62% SMT1/SMT2/SMT3 104 1.62% CYP71 104 1.62% BR6OX2/CYP85A2 103 1.6% COMT 102 1.59% H6H 95 1.48% UFGT 94 1.46% CAS 93 1.45% PYKS 88 1.37% STR 83 1.29% CODM/T6ODM 78 1.21% GS 78 1.21% LAC 77 1.2% TRI/TRII 72 1.12% T16H 72 1.12% CSE 71 1.11% TPS 66 1.03% G8O/G8H 65 1.01% 16OMT 62 0.96% GES 62 0.96% IFR 62 0.96% PAL 60 0.93% CHS 60 0.93% CCR 58 0.9% SGD 57 0.89% RAS 54 0.84% HCT 50 0.78% ANR 49 0.76% F5H/CYP84A 49 0.76% CYP90D1 48 0.75% PMT 47 0.73% FNS 47 0.73% IO 42 0.65% BR6OX1/CYP85A1 40 0.62% SLS 38 0.59% F3'5'H/CYP75A 38 0.59% NCS 36 0.56% DFR 33 0.51% CYP51G1 32 0.5% BBE 30 0.47% 8HGO 27 0.42% 7DLH 26 0.4% CPD/CYP90A1 24 0.37% COR 23 0.36% ANS/LDOX 22 0.34% TAT 22 0.34% CCoAOMT 19 0.3% LAMT 18 0.28% CPR 18 0.28% DXS 18 0.28% MPO 14 0.22% CYP719 14 0.22% CHI 14 0.22% AACT 14 0.22% ROT3/CYP90C1 13 0.2% CNMT 11 0.17% TDC 11 0.17% SQS/FDFT1 11 0.17% FPPS 11 0.17% HPPR 10 0.16% DWF1 10 0.16% SMO1/SMO2 10 0.16% HMGR 9 0.14% TYDC_DDC 8 0.12% CYP80B1 8 0.12% FLS 7 0.11% SQE 7 0.11% MVK 7 0.11% ISY 6 0.09% ADC 6 0.09% FK 6 0.09% DET2 6 0.09% CMK/IspE 6 0.09% GGPPS 6 0.09% HDS/IspG 6 0.09% MVD 6 0.09% 6OMT_4OMT_SOMT 5 0.08% ODC 5 0.08% DWF5 5 0.08% CPI1 4 0.06% HMGS 4 0.06% CYP80F1 3 0.05% XMT_MXMT_DXMT 3 0.05% HYD1 3 0.05% HDR/IspH 3 0.05% IDI 3 0.05% DWF7 2 0.03% PMK 2 0.03% MCT/IspD 2 0.03% DXR 2 0.03% GPPS 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 655 13 POD (227) View species results
Terpenoid pathway 627 21 BAHD (287) View species results
Alkaloid pathway 600 25 NMT (100) View species results
Flavonoid pathway 280 14 UFGT (72) View species results
Rosmarinic acid pathway 247 7 C4H (104) View species results
Steroid pathway 179 12 CAS (82) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2468 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 490 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HDS/IspG
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Gene Pathway Family Confidence Status Best Target
DJ01Gene08040 Terpenoid HDS/IspG medium pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
DJ01Gene24813 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
DJ01Gene44712 Terpenoid HDS/IspG low borderline HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
DJ01Gene50595 Terpenoid HDS/IspG low borderline HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
DJ01Gene63142 Terpenoid HDS/IspG low borderline HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
DJ01Gene71347 Terpenoid HDS/IspG low borderline HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH