Dalbergia odorifera (dalbergia_odorifera)
Imported from atlas release summary for Dalbergia odorifera.
1573
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1573
Candidate Genes
BAHD
6.55%
C4H
5.35%
C3'H/CYP98A
5.13%
POD
4.52%
UGT
4.38%
4CL
4.1%
UFGT
3.9%
7DLGT
3.82%
Other Families
62.25%
More Families (97)
F3H
130
3.62%
IFS
117
3.26%
CYP76
110
3.07%
T3O
104
2.9%
NMT
91
2.54%
CODM/T6ODM
87
2.43%
DWF4/CYP90B1
67
1.87%
STR
62
1.73%
LAC
60
1.67%
F3'H/CYP75B
59
1.64%
CAD
56
1.56%
SMT1/SMT2/SMT3
56
1.56%
H6H
54
1.51%
BR6OX2/CYP85A2
49
1.37%
HCT
45
1.25%
TRI/TRII
42
1.17%
CAS
39
1.09%
PMT
37
1.03%
GS
37
1.03%
PYKS
35
0.98%
SGD
34
0.95%
RAS
34
0.95%
CYP71
34
0.95%
IFR
33
0.92%
COMT
32
0.89%
CYP90D1
32
0.89%
TPS
29
0.81%
G8O/G8H
27
0.75%
GES
26
0.72%
SLS
26
0.72%
CSE
26
0.72%
TAT
24
0.67%
BR6OX1/CYP85A1
23
0.64%
IO
22
0.61%
CPD/CYP90A1
21
0.59%
T16H
20
0.56%
CCR
20
0.56%
FNS
19
0.53%
ANR
19
0.53%
8HGO
18
0.5%
PAL
18
0.5%
7DLH
16
0.45%
F3'5'H/CYP75A
16
0.45%
COR
15
0.42%
DFR
15
0.42%
F5H/CYP84A
15
0.42%
ANS/LDOX
14
0.39%
CCoAOMT
14
0.39%
MPO
13
0.36%
16OMT
13
0.36%
CHS
13
0.36%
CYP51G1
13
0.36%
NCS
12
0.33%
BBE
11
0.31%
DXS
11
0.31%
CYP719
9
0.25%
GGPPS
9
0.25%
AACT
9
0.25%
CNMT
8
0.22%
HPPR
8
0.22%
ROT3/CYP90C1
8
0.22%
SQS/FDFT1
8
0.22%
LAMT
7
0.2%
CPR
7
0.2%
DET2
7
0.2%
TYDC_DDC
5
0.14%
CYP80B1
5
0.14%
MVK
5
0.14%
FPPS
5
0.14%
ISY
4
0.11%
TDC
4
0.11%
CHI
4
0.11%
SMO1/SMO2
4
0.11%
HYD1
4
0.11%
HDS/IspG
4
0.11%
DXR
4
0.11%
MVD
4
0.11%
XMT_MXMT_DXMT
3
0.08%
ADC
3
0.08%
SQE
3
0.08%
CPI1
3
0.08%
HMGS
3
0.08%
HMGR
3
0.08%
6OMT_4OMT_SOMT
2
0.06%
FLS
2
0.06%
CMK/IspE
2
0.06%
PMK
2
0.06%
ODC
1
0.03%
CYP80F1
1
0.03%
DWF5
1
0.03%
DWF1
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
MDS/IspF
1
0.03%
MCT/IspD
1
0.03%
HDR/IspH
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 460 | 20 | BAHD (191) | View species results |
| Phenylpropanoid pathway | 344 | 11 | POD (154) | View species results |
| Alkaloid pathway | 336 | 20 | NMT (58) | View species results |
| Flavonoid pathway | 211 | 13 | UFGT (130) | View species results |
| Rosmarinic acid pathway | 129 | 7 | C4H (38) | View species results |
| Steroid pathway | 93 | 14 | SMT1/SMT2/SMT3 (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1170 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 314 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| dalbergia_odorifera_evm.model.scaffold_36.3 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| dalbergia_odorifera_evm.model.scaffold_36.414 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| dalbergia_odorifera_evm.model.scaffold_36.431 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| dalbergia_odorifera_evm.model.scaffold_36.438 | Alkaloid | NMT | medium | borderline | NMT__00062__sp_Q9SCP7_NAMT1_ARATH |
| dalbergia_odorifera_evm.model.scaffold_376.6 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| dalbergia_odorifera_evm.model.scaffold_378.363 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| dalbergia_odorifera_evm.model.scaffold_39.411 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| dalbergia_odorifera_evm.model.scaffold_394.144 | Alkaloid | NMT | low | borderline | NMT__00030__sp_Q43088_RBCMT_PEA |
| dalbergia_odorifera_evm.model.scaffold_394.45 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| dalbergia_odorifera_evm.model.scaffold_40.31 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| dalbergia_odorifera_evm.model.scaffold_40.683 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| dalbergia_odorifera_evm.model.scaffold_40.708 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| dalbergia_odorifera_evm.model.scaffold_400.33 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| dalbergia_odorifera_evm.model.scaffold_416.721.3 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| dalbergia_odorifera_evm.model.scaffold_416.971 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| dalbergia_odorifera_evm.model.scaffold_416.972 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| dalbergia_odorifera_evm.model.scaffold_417.85 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| dalbergia_odorifera_evm.model.scaffold_417.86 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| dalbergia_odorifera_evm.model.scaffold_419.172 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| dalbergia_odorifera_evm.model.scaffold_419.174 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| dalbergia_odorifera_evm.model.scaffold_419.242 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| dalbergia_odorifera_evm.model.scaffold_424.36 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| dalbergia_odorifera_evm.model.scaffold_44.130 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| dalbergia_odorifera_evm.model.scaffold_44.470 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| dalbergia_odorifera_evm.model.scaffold_457.185 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| dalbergia_odorifera_evm.model.scaffold_457.186 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| dalbergia_odorifera_evm.model.scaffold_46.266.4 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| dalbergia_odorifera_evm.model.scaffold_46.438 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| dalbergia_odorifera_evm.model.scaffold_46.86 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| dalbergia_odorifera_evm.model.scaffold_461.792 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| dalbergia_odorifera_evm.model.scaffold_461.870 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| dalbergia_odorifera_evm.model.scaffold_5.1125 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| dalbergia_odorifera_evm.model.scaffold_5.1935 | Alkaloid | NMT | medium | pass | NMT__00030__sp_Q43088_RBCMT_PEA |
| dalbergia_odorifera_evm.model.scaffold_62.15 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| dalbergia_odorifera_evm.model.scaffold_62.16 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| dalbergia_odorifera_evm.model.scaffold_62.20 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| dalbergia_odorifera_evm.model.scaffold_62.60 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| dalbergia_odorifera_evm.model.scaffold_9.17 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| dalbergia_odorifera_evm.model.scaffold_9.217.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| dalbergia_odorifera_evm.model.scaffold_9.218 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| dalbergia_odorifera_evm.model.scaffold_97.241 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |