Dalbergia odorifera (dalbergia_odorifera)
Imported from atlas release summary for Dalbergia odorifera.
1829
Candidate Protein Records
1573
Pathway-Level Records
3587
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3587
Family-Level Calls
BAHD
6.55%
C4H
5.35%
C3'H/CYP98A
5.13%
POD
4.52%
UGT
4.38%
4CL
4.1%
UFGT
3.9%
7DLGT
3.82%
Other Families
62.25%
More Families (97)
F3H
130
3.62%
IFS
117
3.26%
CYP76
110
3.07%
T3O
104
2.9%
NMT
91
2.54%
CODM/T6ODM
87
2.43%
DWF4/CYP90B1
67
1.87%
STR
62
1.73%
LAC
60
1.67%
F3'H/CYP75B
59
1.64%
CAD
56
1.56%
SMT1/SMT2/SMT3
56
1.56%
H6H
54
1.51%
BR6OX2/CYP85A2
49
1.37%
HCT
45
1.25%
TRI/TRII
42
1.17%
CAS
39
1.09%
PMT
37
1.03%
GS
37
1.03%
PYKS
35
0.98%
SGD
34
0.95%
RAS
34
0.95%
CYP71
34
0.95%
IFR
33
0.92%
COMT
32
0.89%
CYP90D1
32
0.89%
TPS
29
0.81%
G8O/G8H
27
0.75%
GES
26
0.72%
SLS
26
0.72%
CSE
26
0.72%
TAT
24
0.67%
BR6OX1/CYP85A1
23
0.64%
IO
22
0.61%
CPD/CYP90A1
21
0.59%
T16H
20
0.56%
CCR
20
0.56%
FNS
19
0.53%
ANR
19
0.53%
8HGO
18
0.5%
PAL
18
0.5%
7DLH
16
0.45%
F3'5'H/CYP75A
16
0.45%
COR
15
0.42%
DFR
15
0.42%
F5H/CYP84A
15
0.42%
ANS/LDOX
14
0.39%
CCoAOMT
14
0.39%
MPO
13
0.36%
16OMT
13
0.36%
CHS
13
0.36%
CYP51G1
13
0.36%
NCS
12
0.33%
BBE
11
0.31%
DXS
11
0.31%
CYP719
9
0.25%
GGPPS
9
0.25%
AACT
9
0.25%
CNMT
8
0.22%
HPPR
8
0.22%
ROT3/CYP90C1
8
0.22%
SQS/FDFT1
8
0.22%
LAMT
7
0.2%
CPR
7
0.2%
DET2
7
0.2%
TYDC_DDC
5
0.14%
CYP80B1
5
0.14%
MVK
5
0.14%
FPPS
5
0.14%
ISY
4
0.11%
TDC
4
0.11%
CHI
4
0.11%
SMO1/SMO2
4
0.11%
HYD1
4
0.11%
HDS/IspG
4
0.11%
DXR
4
0.11%
MVD
4
0.11%
XMT_MXMT_DXMT
3
0.08%
ADC
3
0.08%
SQE
3
0.08%
CPI1
3
0.08%
HMGS
3
0.08%
HMGR
3
0.08%
6OMT_4OMT_SOMT
2
0.06%
FLS
2
0.06%
CMK/IspE
2
0.06%
PMK
2
0.06%
ODC
1
0.03%
CYP80F1
1
0.03%
DWF5
1
0.03%
DWF1
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
MDS/IspF
1
0.03%
MCT/IspD
1
0.03%
HDR/IspH
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 460 | 20 | BAHD (191) | View species results |
| Phenylpropanoid pathway | 344 | 11 | POD (154) | View species results |
| Alkaloid pathway | 336 | 20 | NMT (58) | View species results |
| Flavonoid pathway | 211 | 13 | UFGT (130) | View species results |
| Rosmarinic acid pathway | 129 | 7 | C4H (38) | View species results |
| Steroid pathway | 93 | 14 | SMT1/SMT2/SMT3 (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1170 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 314 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| dalbergia_odorifera_evm.model.scaffold_222.773 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_222.914 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_222.915 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_233.232 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_248.180 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_248.181 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_248.187 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_273.320 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_28.904.2 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_28.989 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_300.33 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_300.34 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_300.37 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_320.482 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_320.483 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_320.487 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_378.334 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_378.355 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_378.356 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_378.357 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_384.344 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_396.191 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_42.408 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_44.164 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_457.279 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_46.581 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_461.526 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_47.3 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_48.283 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_5.1639 | Alkaloid | TRI/TRII | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_5.1694 | Alkaloid | TRI/TRII | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_62.78 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_97.163 | Alkaloid | TRI/TRII | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_206.858 | Alkaloid | TYDC_DDC | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_222.1308 | Alkaloid | TYDC_DDC | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_375.765 | Alkaloid | TYDC_DDC | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_419.278 | Alkaloid | TYDC_DDC | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_419.279 | Alkaloid | TYDC_DDC | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_162.73 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_320.243 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| dalbergia_odorifera_evm.model.scaffold_333.33 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_100.1024 | Flavonoid | 4CL | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_100.827 | Flavonoid | 4CL | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_100.868 | Flavonoid | 4CL | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_100.869 | Flavonoid | 4CL | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_100.919 | Flavonoid | 4CL | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_140.1 | Flavonoid | 4CL | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_176.283 | Flavonoid | 4CL | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_176.284 | Flavonoid | 4CL | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_176.285 | Flavonoid | 4CL | medium | pass |