Dalbergia odorifera (dalbergia_odorifera)
Imported from atlas release summary for Dalbergia odorifera.
1573
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1573
Candidate Genes
BAHD
6.55%
C4H
5.35%
C3'H/CYP98A
5.13%
POD
4.52%
UGT
4.38%
4CL
4.1%
UFGT
3.9%
7DLGT
3.82%
Other Families
62.25%
More Families (97)
F3H
130
3.62%
IFS
117
3.26%
CYP76
110
3.07%
T3O
104
2.9%
NMT
91
2.54%
CODM/T6ODM
87
2.43%
DWF4/CYP90B1
67
1.87%
STR
62
1.73%
LAC
60
1.67%
F3'H/CYP75B
59
1.64%
CAD
56
1.56%
SMT1/SMT2/SMT3
56
1.56%
H6H
54
1.51%
BR6OX2/CYP85A2
49
1.37%
HCT
45
1.25%
TRI/TRII
42
1.17%
CAS
39
1.09%
PMT
37
1.03%
GS
37
1.03%
PYKS
35
0.98%
SGD
34
0.95%
RAS
34
0.95%
CYP71
34
0.95%
IFR
33
0.92%
COMT
32
0.89%
CYP90D1
32
0.89%
TPS
29
0.81%
G8O/G8H
27
0.75%
GES
26
0.72%
SLS
26
0.72%
CSE
26
0.72%
TAT
24
0.67%
BR6OX1/CYP85A1
23
0.64%
IO
22
0.61%
CPD/CYP90A1
21
0.59%
T16H
20
0.56%
CCR
20
0.56%
FNS
19
0.53%
ANR
19
0.53%
8HGO
18
0.5%
PAL
18
0.5%
7DLH
16
0.45%
F3'5'H/CYP75A
16
0.45%
COR
15
0.42%
DFR
15
0.42%
F5H/CYP84A
15
0.42%
ANS/LDOX
14
0.39%
CCoAOMT
14
0.39%
MPO
13
0.36%
16OMT
13
0.36%
CHS
13
0.36%
CYP51G1
13
0.36%
NCS
12
0.33%
BBE
11
0.31%
DXS
11
0.31%
CYP719
9
0.25%
GGPPS
9
0.25%
AACT
9
0.25%
CNMT
8
0.22%
HPPR
8
0.22%
ROT3/CYP90C1
8
0.22%
SQS/FDFT1
8
0.22%
LAMT
7
0.2%
CPR
7
0.2%
DET2
7
0.2%
TYDC_DDC
5
0.14%
CYP80B1
5
0.14%
MVK
5
0.14%
FPPS
5
0.14%
ISY
4
0.11%
TDC
4
0.11%
CHI
4
0.11%
SMO1/SMO2
4
0.11%
HYD1
4
0.11%
HDS/IspG
4
0.11%
DXR
4
0.11%
MVD
4
0.11%
XMT_MXMT_DXMT
3
0.08%
ADC
3
0.08%
SQE
3
0.08%
CPI1
3
0.08%
HMGS
3
0.08%
HMGR
3
0.08%
6OMT_4OMT_SOMT
2
0.06%
FLS
2
0.06%
CMK/IspE
2
0.06%
PMK
2
0.06%
ODC
1
0.03%
CYP80F1
1
0.03%
DWF5
1
0.03%
DWF1
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
MDS/IspF
1
0.03%
MCT/IspD
1
0.03%
HDR/IspH
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 460 | 20 | BAHD (191) | View species results |
| Phenylpropanoid pathway | 344 | 11 | POD (154) | View species results |
| Alkaloid pathway | 336 | 20 | NMT (58) | View species results |
| Flavonoid pathway | 211 | 13 | UFGT (130) | View species results |
| Rosmarinic acid pathway | 129 | 7 | C4H (38) | View species results |
| Steroid pathway | 93 | 14 | SMT1/SMT2/SMT3 (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1170 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 314 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| dalbergia_odorifera_evm.model.scaffold_5.1707 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_5.1787 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_5.451 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_5.453 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_5.455 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_5.805 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_56.144 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_69.286 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_69.288 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_69.359 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_69.360 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_69.404 | Rosmarinic Acid | C4H | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_69.48 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_7.289 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_7.333 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_86.15 | Rosmarinic Acid | C4H | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_97.210 | Rosmarinic Acid | C4H | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_97.211 | Rosmarinic Acid | C4H | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_97.240 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_97.490 | Rosmarinic Acid | C4H | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_142.278 | Rosmarinic Acid | CPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_28.260 | Rosmarinic Acid | CPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_378.22 | Rosmarinic Acid | CPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_396.265 | Rosmarinic Acid | CPR | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_427.119 | Rosmarinic Acid | CPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_457.187 | Rosmarinic Acid | CPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_64.3 | Rosmarinic Acid | CPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_290.705 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_394.411 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_40.1465.2 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_40.1467 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_457.554 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_457.561 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_457.572 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_457.573 | Rosmarinic Acid | HPPR | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_111.47 | Rosmarinic Acid | PAL | high | pass |
| dalbergia_odorifera_evm.model.scaffold_113.121 | Rosmarinic Acid | PAL | high | pass |
| dalbergia_odorifera_evm.model.scaffold_222.1129 | Rosmarinic Acid | PAL | high | pass |
| dalbergia_odorifera_evm.model.scaffold_263.80 | Rosmarinic Acid | PAL | high | pass |
| dalbergia_odorifera_evm.model.scaffold_69.470 | Rosmarinic Acid | PAL | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_69.471 | Rosmarinic Acid | PAL | high | pass |
| dalbergia_odorifera_evm.model.scaffold_113.5 | Rosmarinic Acid | RAS | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_137.7 | Rosmarinic Acid | RAS | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_185.188 | Rosmarinic Acid | RAS | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_185.190 | Rosmarinic Acid | RAS | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_185.193 | Rosmarinic Acid | RAS | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_185.28 | Rosmarinic Acid | RAS | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_196.40 | Rosmarinic Acid | RAS | low | borderline |
| dalbergia_odorifera_evm.model.scaffold_202.7 | Rosmarinic Acid | RAS | medium | pass |
| dalbergia_odorifera_evm.model.scaffold_206.138 | Rosmarinic Acid | RAS | low | borderline |