Dendrobium huoshanense (dendrobium_huoshanense)
Imported from atlas release summary for Dendrobium huoshanense.
1119
Candidate Protein Records
916
Pathway-Level Records
2531
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2531
Family-Level Calls
C4H
7.51%
C3'H/CYP98A
6.68%
4CL
5.1%
T3O
4.54%
BAHD
4.27%
IFS
4.07%
POD
3.32%
CYP76
3.2%
Other Families
61.32%
More Families (94)
CYP71
79
3.12%
DWF4/CYP90B1
78
3.08%
UGT
75
2.96%
UFGT
72
2.84%
7DLGT
71
2.81%
F3'H/CYP75B
71
2.81%
F3H
61
2.41%
NMT
57
2.25%
STR
54
2.13%
CAD
47
1.86%
BR6OX2/CYP85A2
47
1.86%
CODM/T6ODM
42
1.66%
SMT1/SMT2/SMT3
35
1.38%
CAS
32
1.26%
TPS
31
1.22%
GES
30
1.19%
H6H
29
1.15%
IFR
29
1.15%
CYP90D1
28
1.11%
SLS
25
0.99%
T16H
25
0.99%
CSE
25
0.99%
LAC
24
0.95%
PYKS
23
0.91%
GS
20
0.79%
8HGO
20
0.79%
TRI/TRII
20
0.79%
SGD
19
0.75%
G8O/G8H
18
0.71%
ANS/LDOX
17
0.67%
F5H/CYP84A
16
0.63%
CYP51G1
16
0.63%
FNS
15
0.59%
CCR
14
0.55%
RAS
13
0.51%
IO
12
0.47%
NCS
12
0.47%
DFR
12
0.47%
PAL
12
0.47%
COMT
12
0.47%
ANR
11
0.43%
HCT
10
0.4%
ROT3/CYP90C1
9
0.36%
BR6OX1/CYP85A1
9
0.36%
16OMT
8
0.32%
PMT
8
0.32%
F3'5'H/CYP75A
8
0.32%
COR
7
0.28%
BBE
7
0.28%
MPO
7
0.28%
CPD/CYP90A1
7
0.28%
TYDC_DDC
6
0.24%
CYP80B1
6
0.24%
CNMT
6
0.24%
CHS
6
0.24%
CCoAOMT
6
0.24%
TAT
6
0.24%
SQS/FDFT1
6
0.24%
CPR
5
0.2%
DET2
5
0.2%
IDI
5
0.2%
GGPPS
5
0.2%
DWF1
4
0.16%
MVK
4
0.16%
7DLH
3
0.12%
LAMT
3
0.12%
CYP719
3
0.12%
SQE
3
0.12%
HMGR
3
0.12%
DXS
3
0.12%
MVD
3
0.12%
FPPS
3
0.12%
HDS/IspG
3
0.12%
ADC
2
0.08%
6OMT_4OMT_SOMT
2
0.08%
SMO1/SMO2
2
0.08%
AACT
2
0.08%
MCT/IspD
2
0.08%
TDC
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ISY
1
0.04%
CHI
1
0.04%
HPPR
1
0.04%
DWF5
1
0.04%
DWF7
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
HYD1
1
0.04%
PMK
1
0.04%
GPPS
1
0.04%
DXR
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
HDR/IspH
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 231 | 17 | UGT (72) | View species results |
| Alkaloid pathway | 206 | 18 | NMT (40) | View species results |
| Phenylpropanoid pathway | 202 | 11 | POD (72) | View species results |
| Flavonoid pathway | 129 | 9 | UFGT (68) | View species results |
| Rosmarinic acid pathway | 94 | 7 | C4H (42) | View species results |
| Steroid pathway | 54 | 13 | CAS (18) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1118 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 131 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Dhuo08G0002860 | Rosmarinic Acid | 4CL | low | borderline |
| Dhuo10G0009690 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo12G0002300 | Rosmarinic Acid | 4CL | low | borderline |
| Dhuo12G0003140 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo12G0004480 | Rosmarinic Acid | 4CL | low | borderline |
| Dhuo12G0007550 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo12G0007570 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo13G0003290 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo15G0003290 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo15G0003340 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0001470 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0001860 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0002770 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0010490 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0010520 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0013040 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0014510 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0018520 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0018530 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo17G0019220 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo18G0004650 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo18G0004680 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo18G0004690 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo18G0005590 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo18G0009670 | Rosmarinic Acid | 4CL | low | borderline |
| Dhuo18G0013570 | Rosmarinic Acid | 4CL | low | borderline |
| Dhuo19G0001810 | Rosmarinic Acid | 4CL | medium | pass |
| DhuoScaffold22110002770 | Rosmarinic Acid | 4CL | medium | pass |
| DhuoScaffold22110002780 | Rosmarinic Acid | 4CL | medium | pass |
| Dhuo01G0002230 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0002330 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0002360 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0002390 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0003080 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0005280 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0005460 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007530 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007570 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007590 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007600 | Rosmarinic Acid | C4H | medium | pass |
| Dhuo01G0007610 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007620 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007630 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007640 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007650 | Rosmarinic Acid | C4H | medium | pass |
| Dhuo01G0007660 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007670 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007690 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo01G0007700 | Rosmarinic Acid | C4H | low | borderline |
| Dhuo02G0003350 | Rosmarinic Acid | C4H | low | borderline |