PlantSME Plant secondary metabolism enzyme database

Dicranum fulvum (dicranum_fulvum)

Imported from atlas release summary for Dicranum fulvum.

1056
Candidate Protein Records
744
Pathway-Level Records
1965
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 24.19% Terpenoid pathway 23.66% Alkaloid pathway 20.7% Flavonoid pathway 13.31% Rosmarinic acid pathway 11.56% Steroid pathway 6.59%
Family Distribution
C4H 6.97% C3'H/CYP98A 5.65% BAHD 5.55% 4CL 4.73% POD 4.63% CYP76 4.63% IFS 3.41% NMT 3.1%
Other Families 61.32%
More Families (96)
STR 52 2.65% T3O 50 2.54% DWF4/CYP90B1 47 2.39% GS 46 2.34% F3H 45 2.29% UGT 44 2.24% 7DLGT 41 2.09% BR6OX2/CYP85A2 39 1.98% UFGT 38 1.93% IFR 36 1.83% PAL 36 1.83% F3'H/CYP75B 35 1.78% IO 32 1.63% CODM/T6ODM 28 1.42% SMT1/SMT2/SMT3 25 1.27% PYKS 24 1.22% H6H 23 1.17% CAD 23 1.17% COMT 20 1.02% CYP71 20 1.02% G8O/G8H 19 0.97% F3'5'H/CYP75A 19 0.97% 16OMT 17 0.87% TRI/TRII 17 0.87% T16H 17 0.87% CHS 16 0.81% LAC 16 0.81% CAS 16 0.81% ANR 15 0.76% RAS 14 0.71% CPR 14 0.71% SLS 12 0.61% COR 12 0.61% HCT 12 0.61% CYP90D1 12 0.61% BBE 11 0.56% CSE 11 0.56% NCS 10 0.51% 8HGO 9 0.46% 7DLH 9 0.46% BR6OX1/CYP85A1 9 0.46% MPO 8 0.41% SGD 8 0.41% FNS 8 0.41% CPD/CYP90A1 8 0.41% DET2 8 0.41% SQS/FDFT1 8 0.41% AACT 8 0.41% LAMT 7 0.36% CNMT 7 0.36% ANS/LDOX 7 0.36% CCR 7 0.36% DWF5 7 0.36% ADC 6 0.31% SQE 6 0.31% PMT 5 0.25% DFR 5 0.25% F5H/CYP84A 5 0.25% TAT 5 0.25% HDS/IspG 5 0.25% CYP719 4 0.2% ROT3/CYP90C1 4 0.2% CMK/IspE 4 0.2% DXR 4 0.2% GGPPS 4 0.2% TDC 3 0.15% CYP80B1 3 0.15% FLS 3 0.15% HPPR 3 0.15% HYD1 3 0.15% DWF1 3 0.15% CYP51G1 3 0.15% MVK 3 0.15% TPS 3 0.15% MCT/IspD 3 0.15% FPPS 3 0.15% ISY 2 0.1% XMT_MXMT_DXMT 2 0.1% TYDC_DDC 2 0.1% 6OMT_4OMT_SOMT 2 0.1% GES 2 0.1% CHI 2 0.1% CCoAOMT 2 0.1% MVD 2 0.1% HMGR 2 0.1% HMGS 2 0.1% PMK 2 0.1% MDS/IspF 2 0.1% HDR/IspH 2 0.1% CYP80F1 1 0.05% FK 1 0.05% CPI1 1 0.05% DWF7 1 0.05% SMO1/SMO2 1 0.05% DXS 1 0.05% IDI 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 180 12 POD (79) View species results
Terpenoid pathway 176 19 BAHD (70) View species results
Alkaloid pathway 154 17 NMT (28) View species results
Flavonoid pathway 99 10 UFGT (33) View species results
Rosmarinic acid pathway 86 7 C4H (34) View species results
Steroid pathway 49 13 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 754 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 135 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Protein/Isoform Record Pathway Family Confidence Status Best Target
DICful9170298100 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
DICful9610298830 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR