PlantSME Plant secondary metabolism enzyme database

Digitaria exilis (digitaria_exilis)

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Imported from atlas release summary for Digitaria exilis.

3834
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.97% Alkaloid pathway 22.38% Phenylpropanoid pathway 21.54% Flavonoid pathway 14.53% Rosmarinic acid pathway 8.89% Steroid pathway 5.69%
Family Distribution
C4H 6.76% C3'H/CYP98A 6.07% BAHD 5.57% POD 4.6% UGT 4.31% 7DLGT 4.11% UFGT 3.96% T3O 3.5%
Other Families 61.12%
More Families (97)
CYP76 318 3.4% IFS 313 3.35% 4CL 267 2.86% F3'H/CYP75B 255 2.73% DWF4/CYP90B1 232 2.48% BR6OX2/CYP85A2 224 2.4% F3H 216 2.31% CYP71 174 1.86% NMT 144 1.54% SMT1/SMT2/SMT3 123 1.32% CODM/T6ODM 116 1.24% STR 115 1.23% HCT 114 1.22% H6H 112 1.2% LAC 112 1.2% CAS 111 1.19% G8O/G8H 106 1.13% TPS 106 1.13% PMT 102 1.09% CAD 100 1.07% RAS 97 1.04% PYKS 93 1.0% CCR 92 0.98% SLS 89 0.95% TRI/TRII 83 0.89% COMT 83 0.89% GES 82 0.88% IFR 81 0.87% SGD 76 0.81% CSE 75 0.8% NCS 71 0.76% T16H 69 0.74% ANR 68 0.73% CYP90D1 68 0.73% CHS 65 0.7% F5H/CYP84A 61 0.65% 16OMT 56 0.6% DFR 56 0.6% GS 55 0.59% F3'5'H/CYP75A 55 0.59% FNS 53 0.57% COR 51 0.55% CYP51G1 41 0.44% 7DLH 36 0.39% PAL 36 0.39% IO 34 0.36% BBE 33 0.35% CPD/CYP90A1 33 0.35% BR6OX1/CYP85A1 32 0.34% SMO1/SMO2 31 0.33% 6OMT_4OMT_SOMT 30 0.32% FPPS 30 0.32% CNMT 24 0.26% 8HGO 23 0.25% ANS/LDOX 23 0.25% TAT 23 0.25% LAMT 21 0.22% HPPR 18 0.19% CYP719 16 0.17% AACT 16 0.17% ROT3/CYP90C1 15 0.16% XMT_MXMT_DXMT 14 0.15% CCoAOMT 14 0.15% CPR 14 0.15% MVK 14 0.15% GGPPS 14 0.15% MPO 13 0.14% CYP80B1 11 0.12% CYP80F1 10 0.11% SQS/FDFT1 10 0.11% TYDC_DDC 9 0.1% FLS 9 0.1% DXS 9 0.1% ODC 8 0.09% CHI 8 0.09% MVD 8 0.09% IDI 8 0.09% MCT/IspD 8 0.09% HYD1 7 0.07% HMGS 7 0.07% ISY 6 0.06% DET2 6 0.06% HMGR 6 0.06% TDC 5 0.05% ADC 4 0.04% DWF1 4 0.04% MDS/IspF 4 0.04% HDS/IspG 4 0.04% FK 3 0.03% CPI1 3 0.03% SQE 3 0.03% PMK 3 0.03% DXR 3 0.03% DWF5 2 0.02% DWF7 2 0.02% CMK/IspE 2 0.02% HDR/IspH 2 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1034 20 UGT (363) View species results
Alkaloid pathway 858 25 7DLGT (200) View species results
Phenylpropanoid pathway 826 11 POD (410) View species results
Flavonoid pathway 557 12 UFGT (345) View species results
Rosmarinic acid pathway 341 7 C4H (172) View species results
Steroid pathway 218 13 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3718 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 731 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status Best Target
digitaria_exilis_Dexi3A01G0007440.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
digitaria_exilis_Dexi3A01G0019310.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
digitaria_exilis_Dexi3B01G0007370.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
digitaria_exilis_Dexi3B01G0019800.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
digitaria_exilis_Dexi5A01G0028250.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
digitaria_exilis_Dexi5B01G0028490.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00004__sp_Q94EE9_TYDC_ORYSJ
digitaria_exilis_Dexi6A01G0003390.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
digitaria_exilis_Dexi6B01G0003200.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
digitaria_exilis_Dexi9A01G0024720.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO