PlantSME Plant secondary metabolism enzyme database

Dimocarpus longan (dimocarpus_longan)

Imported from atlas release summary for Dimocarpus longan.

2054
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.26% Alkaloid pathway 23.03% Phenylpropanoid pathway 18.21% Flavonoid pathway 14.61% Rosmarinic acid pathway 8.47% Steroid pathway 6.43%
Family Distribution
C3'H/CYP98A 6.52% C4H 6.48% UGT 4.58% BAHD 4.48% IFS 4.4% 7DLGT 4.19% UFGT 4.13% CYP76 3.83%
Other Families 61.4%
More Families (95)
T3O 195 3.82% 4CL 165 3.23% POD 152 2.97% F3H 128 2.5% BR6OX2/CYP85A2 110 2.15% DWF4/CYP90B1 104 2.03% TPS 103 2.02% CAS 102 2.0% GES 99 1.94% CAD 97 1.9% F3'H/CYP75B 93 1.82% CYP71 90 1.76% CODM/T6ODM 85 1.66% NMT 82 1.6% STR 65 1.27% H6H 62 1.21% LAC 56 1.1% CYP90D1 55 1.08% SMT1/SMT2/SMT3 53 1.04% TRI/TRII 52 1.02% BBE 49 0.96% G8O/G8H 44 0.86% IFR 44 0.86% COMT 41 0.8% SGD 39 0.76% GS 38 0.74% PYKS 38 0.74% IO 37 0.72% F3'5'H/CYP75A 37 0.72% CSE 36 0.7% 7DLH 34 0.67% HCT 34 0.67% TAT 34 0.67% CPD/CYP90A1 33 0.65% SLS 31 0.61% CHS 31 0.61% F5H/CYP84A 31 0.61% T16H 29 0.57% ANR 26 0.51% CYP51G1 26 0.51% CCR 25 0.49% 16OMT 24 0.47% BR6OX1/CYP85A1 23 0.45% PMT 21 0.41% PAL 21 0.41% FNS 20 0.39% RAS 20 0.39% COR 17 0.33% HPPR 17 0.33% NCS 16 0.31% 8HGO 16 0.31% ANS/LDOX 16 0.31% CYP80B1 14 0.27% CNMT 14 0.27% ROT3/CYP90C1 14 0.27% LAMT 13 0.25% DET2 13 0.25% GGPPS 12 0.23% DFR 11 0.22% AACT 11 0.22% CYP719 10 0.2% MPO 10 0.2% SQE 9 0.18% CCoAOMT 8 0.16% CPR 8 0.16% SQS/FDFT1 8 0.16% SMO1/SMO2 8 0.16% DXS 7 0.14% FPPS 7 0.14% TYDC_DDC 5 0.1% ISY 5 0.1% XMT_MXMT_DXMT 4 0.08% CHI 4 0.08% MVK 4 0.08% MCT/IspD 4 0.08% FLS 3 0.06% DWF5 3 0.06% DXR 3 0.06% HMGS 3 0.06% HMGR 3 0.06% MVD 3 0.06% ODC 2 0.04% TDC 2 0.04% FK 2 0.04% IDI 2 0.04% MDS/IspF 2 0.04% HDR/IspH 2 0.04% CMK/IspE 2 0.04% ADC 1 0.02% HYD1 1 0.02% DWF7 1 0.02% DWF1 1 0.02% CPI1 1 0.02% PMK 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 601 19 UGT (217) View species results
Alkaloid pathway 473 23 7DLGT (110) View species results
Phenylpropanoid pathway 374 11 POD (148) View species results
Flavonoid pathway 300 11 UFGT (206) View species results
Rosmarinic acid pathway 174 7 C4H (86) View species results
Steroid pathway 132 12 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2095 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 283 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
Dlonscaffold104080014610 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold1170034860 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold1190037140 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold1420068940 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold270167250 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold270167310 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold400229430 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Dlonscaffold400229450 Alkaloid NCS low borderline NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
Dlonscaffold430239230 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Dlonscaffold4640252140 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold490260160 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold5100269550 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold700330490 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Dlonscaffold740340830 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Dlonscaffold740340840 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
Dlonscaffold740340890 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO