Distichophyllum collenchymatosum (distichophyllum_collenchymatosum)
Imported from atlas release summary for Distichophyllum collenchymatosum.
551
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
551
Candidate Genes
POD
6.47%
BAHD
6.39%
C4H
5.05%
PAL
4.97%
C3'H/CYP98A
4.89%
4CL
4.73%
NMT
4.34%
CYP76
3.55%
Other Families
59.62%
More Families (93)
PYKS
37
2.92%
STR
36
2.84%
IFS
35
2.76%
T3O
30
2.37%
GS
30
2.37%
IFR
30
2.37%
F3'H/CYP75B
29
2.29%
DWF4/CYP90B1
29
2.29%
CHS
28
2.21%
CAD
23
1.81%
F3H
22
1.74%
BR6OX2/CYP85A2
22
1.74%
CODM/T6ODM
18
1.42%
SMT1/SMT2/SMT3
15
1.18%
UFGT
14
1.1%
HCT
14
1.1%
CYP71
14
1.1%
UGT
14
1.1%
IO
13
1.03%
CAS
13
1.03%
7DLGT
12
0.95%
TRI/TRII
11
0.87%
CSE
11
0.87%
LAC
10
0.79%
T16H
9
0.71%
G8O/G8H
9
0.71%
COMT
9
0.71%
RAS
9
0.71%
H6H
8
0.63%
ANR
8
0.63%
CYP90D1
8
0.63%
7DLH
7
0.55%
CNMT
6
0.47%
COR
6
0.47%
TAT
6
0.47%
CPR
6
0.47%
CPD/CYP90A1
6
0.47%
TPS
6
0.47%
8HGO
5
0.39%
BBE
5
0.39%
PMT
5
0.39%
LAMT
5
0.39%
SGD
5
0.39%
SLS
5
0.39%
GES
5
0.39%
SQS/FDFT1
5
0.39%
GGPPS
5
0.39%
TDC
4
0.32%
F3'5'H/CYP75A
4
0.32%
CCR
4
0.32%
DET2
4
0.32%
DWF5
4
0.32%
HYD1
4
0.32%
AACT
4
0.32%
NCS
3
0.24%
CHI
3
0.24%
DFR
3
0.24%
CCoAOMT
3
0.24%
F5H/CYP84A
3
0.24%
SMO1/SMO2
3
0.24%
ROT3/CYP90C1
3
0.24%
SQE
3
0.24%
16OMT
2
0.16%
TYDC_DDC
2
0.16%
CYP80B1
2
0.16%
ADC
2
0.16%
ANS/LDOX
2
0.16%
FLS
2
0.16%
FNS
2
0.16%
BR6OX1/CYP85A1
2
0.16%
FK
2
0.16%
CYP51G1
2
0.16%
MVD
2
0.16%
FPPS
2
0.16%
MCT/IspD
2
0.16%
IDI
2
0.16%
MVK
2
0.16%
CYP80F1
1
0.08%
6OMT_4OMT_SOMT
1
0.08%
ISY
1
0.08%
MPO
1
0.08%
CPI1
1
0.08%
DWF1
1
0.08%
DWF7
1
0.08%
HDS/IspG
1
0.08%
PMK
1
0.08%
HMGS
1
0.08%
GPPS
1
0.08%
DXS
1
0.08%
HMGR
1
0.08%
MDS/IspF
1
0.08%
DXR
1
0.08%
CMK/IspE
1
0.08%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 154 | 11 | POD (79) | View species results |
| Terpenoid pathway | 112 | 18 | BAHD (51) | View species results |
| Alkaloid pathway | 111 | 18 | PYKS (27) | View species results |
| Flavonoid pathway | 78 | 8 | CHS (27) | View species results |
| Rosmarinic acid pathway | 61 | 6 | PAL (21) | View species results |
| Steroid pathway | 35 | 12 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 404 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 104 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Dcolcontig_1090004790 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1260014870 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1280018520 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcolcontig_1340027410 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcolcontig_1380033200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1380033210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1390036500 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1390037180 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1390037720 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcolcontig_1400041950 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1620052210 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1620052230 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1760072240 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1760075810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_1940093350 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_200100510 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_240114580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_290124230 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_310135730 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_310140940 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_310141000 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcolcontig_310144450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_310146330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_410150840 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_540159930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_590167450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_590167460 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_630176530 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_630179110 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_870199320 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_890202650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_890204090 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Dcolcontig_900206360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_960224010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_960225080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Dcolcontig_960229330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |