PlantSME Plant secondary metabolism enzyme database

Dorcoceras hygrometricum (dorcoceras_hygrometricum)

Imported from atlas release summary for Dorcoceras hygrometricum.

973
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.01% Phenylpropanoid pathway 21.58% Alkaloid pathway 19.12% Flavonoid pathway 16.24% Rosmarinic acid pathway 7.91% Steroid pathway 5.14%
Family Distribution
BAHD 5.88% C4H 5.51% UGT 5.34% 7DLGT 5.1% C3'H/CYP98A 5.02% UFGT 4.81% 4CL 4.04% POD 3.96%
Other Families 60.34%
More Families (94)
IFS 93 3.79% CYP76 85 3.47% T3O 77 3.14% DWF4/CYP90B1 70 2.86% F3H 66 2.69% NMT 64 2.61% STR 56 2.28% CODM/T6ODM 47 1.92% F3'H/CYP75B 41 1.67% SMT1/SMT2/SMT3 33 1.35% BR6OX2/CYP85A2 32 1.31% GS 29 1.18% IFR 29 1.18% PYKS 27 1.1% H6H 27 1.1% CAD 27 1.1% CSE 23 0.94% LAC 23 0.94% RAS 22 0.9% TRI/TRII 21 0.86% 7DLH 21 0.86% HCT 21 0.86% CYP71 21 0.86% BBE 20 0.82% ANR 19 0.78% CAS 18 0.73% CPD/CYP90A1 17 0.69% T16H 16 0.65% PAL 15 0.61% CCR 15 0.61% CYP90D1 15 0.61% IO 14 0.57% AACT 14 0.57% HMGS 14 0.57% PMT 13 0.53% SLS 13 0.53% COMT 13 0.53% CCoAOMT 13 0.53% G8O/G8H 12 0.49% COR 12 0.49% ANS/LDOX 12 0.49% SGD 11 0.45% NCS 11 0.45% 16OMT 11 0.45% FNS 11 0.45% F5H/CYP84A 11 0.45% TAT 11 0.45% BR6OX1/CYP85A1 10 0.41% DXR 10 0.41% GES 9 0.37% GGPPS 9 0.37% CNMT 8 0.33% 8HGO 8 0.33% TPS 8 0.33% FPPS 7 0.29% HDR/IspH 7 0.29% LAMT 6 0.24% ISY 6 0.24% F3'5'H/CYP75A 6 0.24% ROT3/CYP90C1 5 0.2% SQE 5 0.2% DET2 5 0.2% CYP80B1 4 0.16% 6OMT_4OMT_SOMT 4 0.16% DFR 4 0.16% CHS 4 0.16% CPR 4 0.16% DWF1 4 0.16% CYP51G1 4 0.16% SQS/FDFT1 4 0.16% DXS 4 0.16% MVD 4 0.16% CYP719 3 0.12% XMT_MXMT_DXMT 3 0.12% MPO 3 0.12% CHI 3 0.12% HDS/IspG 3 0.12% PMK 3 0.12% HMGR 3 0.12% TYDC_DDC 2 0.08% HPPR 2 0.08% CPI1 2 0.08% SMO1/SMO2 2 0.08% FK 2 0.08% MDS/IspF 2 0.08% MVK 2 0.08% CMK/IspE 2 0.08% FLS 1 0.04% DWF7 1 0.04% DWF5 1 0.04% HYD1 1 0.04% GPPS 1 0.04% IDI 1 0.04% MCT/IspD 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 292 19 UGT (127) View species results
Phenylpropanoid pathway 210 11 POD (94) View species results
Alkaloid pathway 186 19 7DLGT (46) View species results
Flavonoid pathway 158 9 UFGT (115) View species results
Rosmarinic acid pathway 77 7 C4H (30) View species results
Steroid pathway 50 11 SMT1/SMT2/SMT3 (19) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 828 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 187 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
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Gene Pathway Family Confidence Status
dorcoceras_hygrometricum_KZV14904.1 Alkaloid PMT medium borderline
dorcoceras_hygrometricum_KZV15357.1 Alkaloid PMT medium borderline
dorcoceras_hygrometricum_KZV19184.1 Alkaloid PMT low borderline
dorcoceras_hygrometricum_KZV19482.1 Alkaloid PMT low borderline
dorcoceras_hygrometricum_KZV26764.1 Alkaloid PMT low borderline
dorcoceras_hygrometricum_KZV27578.1 Alkaloid PMT medium borderline
dorcoceras_hygrometricum_KZV28748.1 Alkaloid PMT low borderline
dorcoceras_hygrometricum_KZV29223.1 Alkaloid PMT medium pass
dorcoceras_hygrometricum_KZV37225.1 Alkaloid PMT medium pass
dorcoceras_hygrometricum_KZV44555.1 Alkaloid PMT low borderline
dorcoceras_hygrometricum_KZV50178.1 Alkaloid PMT low borderline
dorcoceras_hygrometricum_KZV53164.1 Alkaloid PMT low borderline
dorcoceras_hygrometricum_KZV53802.1 Alkaloid PMT medium pass