PlantSME Plant secondary metabolism enzyme database

Erigeron breviscapus (erigeron_breviscapus)

Imported from atlas release summary for Erigeron breviscapus.

2266
Candidate Protein Records
1899
Pathway-Level Records
4831
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 33.6% Phenylpropanoid pathway 22.33% Alkaloid pathway 21.96% Flavonoid pathway 8.58% Rosmarinic acid pathway 7.27% Steroid pathway 6.27%
Family Distribution
C4H 7.62% C3'H/CYP98A 6.81% BAHD 5.86% CYP76 4.43% IFS 4.08% POD 4.0% UGT 3.85% 4CL 3.73%
Other Families 59.64%
More Families (95)
7DLGT 146 3.02% T3O 145 3.0% F3H 139 2.88% DWF4/CYP90B1 118 2.44% F3'H/CYP75B 114 2.36% NMT 96 1.99% BR6OX2/CYP85A2 96 1.99% TPS 94 1.95% UFGT 89 1.84% H6H 87 1.8% GES 72 1.49% STR 72 1.49% CYP90D1 71 1.47% CODM/T6ODM 68 1.41% T16H 64 1.32% IO 64 1.32% CYP71 64 1.32% CAS 63 1.3% CAD 57 1.18% CSE 53 1.1% SMT1/SMT2/SMT3 53 1.1% 7DLH 50 1.03% LAC 49 1.01% TRI/TRII 43 0.89% F3'5'H/CYP75A 43 0.89% SLS 39 0.81% COMT 37 0.77% GS 35 0.72% FNS 35 0.72% PYKS 34 0.7% IFR 33 0.68% F5H/CYP84A 31 0.64% 16OMT 29 0.6% CPD/CYP90A1 29 0.6% G8O/G8H 28 0.58% CCR 25 0.52% PMT 24 0.5% SGD 22 0.46% NCS 22 0.46% CYP51G1 22 0.46% 8HGO 21 0.43% LAMT 20 0.41% ANR 20 0.41% TAT 20 0.41% BR6OX1/CYP85A1 20 0.41% CYP719 16 0.33% PAL 15 0.31% HCT 15 0.31% BBE 14 0.29% RAS 14 0.29% MPO 12 0.25% COR 12 0.25% CHS 12 0.25% ANS/LDOX 12 0.25% ROT3/CYP90C1 12 0.25% DFR 11 0.23% HPPR 10 0.21% CNMT 9 0.19% SQS/FDFT1 9 0.19% AACT 9 0.19% TYDC_DDC 8 0.17% DWF7 8 0.17% DET2 8 0.17% DXS 8 0.17% CYP80B1 7 0.14% DWF1 7 0.14% IDI 7 0.14% HMGR 7 0.14% MVD 7 0.14% HDR/IspH 6 0.12% FPPS 6 0.12% CHI 5 0.1% CPR 5 0.1% SQE 5 0.1% MVK 5 0.1% HDS/IspG 5 0.1% CCoAOMT 4 0.08% SMO1/SMO2 4 0.08% HYD1 3 0.06% MCT/IspD 3 0.06% HMGS 3 0.06% GPPS 3 0.06% XMT_MXMT_DXMT 2 0.04% FLS 2 0.04% DWF5 2 0.04% FK 2 0.04% PMK 2 0.04% DXR 2 0.04% ODC 1 0.02% 6OMT_4OMT_SOMT 1 0.02% TDC 1 0.02% CPI1 1 0.02% MDS/IspF 1 0.02% CMK/IspE 1 0.02% GGPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (219) View species results
Phenylpropanoid pathway 424 11 POD (180) View species results
Alkaloid pathway 417 22 7DLGT (64) View species results
Flavonoid pathway 163 12 UFGT (66) View species results
Rosmarinic acid pathway 138 7 C4H (58) View species results
Steroid pathway 119 14 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2141 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 312 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Ebreopera_scaffold_8050348950 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Ebreopera_scaffold_8050348960 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Ebreopera_scaffold_80950349700 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Ebreopera_scaffold_8440355010 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Ebreopera_scaffold_86170357600 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Ebreopera_scaffold_86170357620 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Ebreopera_scaffold_87410359250 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Ebreopera_scaffold_8770359520 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Ebreopera_scaffold_87980359860 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Ebreopera_scaffold_90260363020 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Ebreopera_scaffold_90580363360 Terpenoid CYP76 low borderline CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
Ebreopera_scaffold_92510366080 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Ebreopera_scaffold_97150371950 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Ebreopera_scaffold_99380374320 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO