Erigeron breviscapus (erigeron_breviscapus)
Imported from atlas release summary for Erigeron breviscapus.
1899
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1899
Candidate Genes
C4H
7.62%
C3'H/CYP98A
6.81%
BAHD
5.86%
CYP76
4.43%
IFS
4.08%
POD
4.0%
UGT
3.85%
4CL
3.73%
Other Families
59.64%
More Families (95)
7DLGT
146
3.02%
T3O
145
3.0%
F3H
139
2.88%
DWF4/CYP90B1
118
2.44%
F3'H/CYP75B
114
2.36%
NMT
96
1.99%
BR6OX2/CYP85A2
96
1.99%
TPS
94
1.95%
UFGT
89
1.84%
H6H
87
1.8%
GES
72
1.49%
STR
72
1.49%
CYP90D1
71
1.47%
CODM/T6ODM
68
1.41%
T16H
64
1.32%
IO
64
1.32%
CYP71
64
1.32%
CAS
63
1.3%
CAD
57
1.18%
CSE
53
1.1%
SMT1/SMT2/SMT3
53
1.1%
7DLH
50
1.03%
LAC
49
1.01%
TRI/TRII
43
0.89%
F3'5'H/CYP75A
43
0.89%
SLS
39
0.81%
COMT
37
0.77%
GS
35
0.72%
FNS
35
0.72%
PYKS
34
0.7%
IFR
33
0.68%
F5H/CYP84A
31
0.64%
16OMT
29
0.6%
CPD/CYP90A1
29
0.6%
G8O/G8H
28
0.58%
CCR
25
0.52%
PMT
24
0.5%
SGD
22
0.46%
NCS
22
0.46%
CYP51G1
22
0.46%
8HGO
21
0.43%
LAMT
20
0.41%
ANR
20
0.41%
TAT
20
0.41%
BR6OX1/CYP85A1
20
0.41%
CYP719
16
0.33%
PAL
15
0.31%
HCT
15
0.31%
BBE
14
0.29%
RAS
14
0.29%
MPO
12
0.25%
COR
12
0.25%
CHS
12
0.25%
ANS/LDOX
12
0.25%
ROT3/CYP90C1
12
0.25%
DFR
11
0.23%
HPPR
10
0.21%
CNMT
9
0.19%
SQS/FDFT1
9
0.19%
AACT
9
0.19%
TYDC_DDC
8
0.17%
DWF7
8
0.17%
DET2
8
0.17%
DXS
8
0.17%
CYP80B1
7
0.14%
DWF1
7
0.14%
IDI
7
0.14%
HMGR
7
0.14%
MVD
7
0.14%
HDR/IspH
6
0.12%
FPPS
6
0.12%
CHI
5
0.1%
CPR
5
0.1%
SQE
5
0.1%
MVK
5
0.1%
HDS/IspG
5
0.1%
CCoAOMT
4
0.08%
SMO1/SMO2
4
0.08%
HYD1
3
0.06%
MCT/IspD
3
0.06%
HMGS
3
0.06%
GPPS
3
0.06%
XMT_MXMT_DXMT
2
0.04%
FLS
2
0.04%
DWF5
2
0.04%
FK
2
0.04%
PMK
2
0.04%
DXR
2
0.04%
ODC
1
0.02%
6OMT_4OMT_SOMT
1
0.02%
TDC
1
0.02%
CPI1
1
0.02%
MDS/IspF
1
0.02%
CMK/IspE
1
0.02%
GGPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 638 | 19 | BAHD (219) | View species results |
| Phenylpropanoid pathway | 424 | 11 | POD (180) | View species results |
| Alkaloid pathway | 417 | 22 | 7DLGT (64) | View species results |
| Flavonoid pathway | 163 | 12 | UFGT (66) | View species results |
| Rosmarinic acid pathway | 138 | 7 | C4H (58) | View species results |
| Steroid pathway | 119 | 14 | CAS (53) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2141 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 312 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ebreopera_scaffold_44510259460 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_44830260540 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_45070261720 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ebreopera_scaffold_455710263720 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ebreopera_scaffold_4640266950 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_501340279690 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ebreopera_scaffold_50740281450 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_55700296360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_61610311620 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ebreopera_scaffold_61700311840 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_65960322310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_6600322390 | Alkaloid | STR | medium | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_67270324930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_7750343700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_7830345260 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_82490351940 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Ebreopera_scaffold_8800359960 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_900362530 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_9330367010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_9620370970 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_9620370980 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Ebreopera_scaffold_9990375000 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |