PlantSME Plant secondary metabolism enzyme database

Eruca sativa (eruca_sativa)

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Imported from atlas release summary for Eruca sativa.

1980
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 33.84% Alkaloid pathway 21.26% Phenylpropanoid pathway 20.56% Flavonoid pathway 10.35% Rosmarinic acid pathway 7.37% Steroid pathway 6.62%
Family Distribution
BAHD 7.59% C4H 5.79% C3'H/CYP98A 5.7% POD 4.3% CYP76 3.96% IFS 3.94% UGT 3.25% 4CL 3.15%
Other Families 62.32%
More Families (95)
T3O 145 3.04% 7DLGT 141 2.96% UFGT 139 2.91% F3H 131 2.75% NMT 123 2.58% DWF4/CYP90B1 119 2.5% BR6OX2/CYP85A2 97 2.03% F3'H/CYP75B 92 1.93% STR 79 1.66% CODM/T6ODM 77 1.61% SGD 75 1.57% SMT1/SMT2/SMT3 75 1.57% CYP71 75 1.57% H6H 65 1.36% CAS 64 1.34% TPS 63 1.32% CSE 62 1.3% TRI/TRII 53 1.11% GES 53 1.11% CAD 50 1.05% PYKS 48 1.01% SLS 47 0.99% IFR 45 0.94% T16H 44 0.92% BBE 43 0.9% LAMT 41 0.86% COMT 41 0.86% PAL 39 0.82% F5H/CYP84A 39 0.82% RAS 38 0.8% LAC 37 0.78% CYP90D1 36 0.75% ANR 35 0.73% TAT 35 0.73% IO 32 0.67% HCT 29 0.61% G8O/G8H 27 0.57% GS 26 0.55% CCR 25 0.52% 16OMT 24 0.5% 8HGO 20 0.42% FNS 20 0.42% CPD/CYP90A1 19 0.4% FPPS 19 0.4% NCS 18 0.38% F3'5'H/CYP75A 18 0.38% BR6OX1/CYP85A1 18 0.38% ANS/LDOX 17 0.36% PMT 16 0.34% GGPPS 15 0.31% CYP51G1 14 0.29% CPR 12 0.25% SQE 12 0.25% AACT 12 0.25% CNMT 11 0.23% 7DLH 11 0.23% CCoAOMT 11 0.23% ROT3/CYP90C1 11 0.23% MPO 10 0.21% COR 10 0.21% CHS 10 0.21% DFR 10 0.21% TYDC_DDC 9 0.19% ISY 9 0.19% CYP80B1 9 0.19% DWF7 9 0.19% CYP719 7 0.15% SMO1/SMO2 7 0.15% SQS/FDFT1 7 0.15% MVD 7 0.15% CYP80F1 6 0.13% HPPR 6 0.13% MVK 6 0.13% XMT_MXMT_DXMT 5 0.1% TDC 5 0.1% CHI 5 0.1% DET2 5 0.1% HMGR 5 0.1% FLS 4 0.08% DXS 4 0.08% IDI 4 0.08% ADC 3 0.06% HDS/IspG 3 0.06% MCT/IspD 3 0.06% FK 2 0.04% DWF1 2 0.04% CPI1 2 0.04% HYD1 2 0.04% HDR/IspH 2 0.04% PMK 2 0.04% CMK/IspE 2 0.04% DXR 2 0.04% HMGS 2 0.04% MDS/IspF 2 0.04% DWF5 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 670 20 BAHD (313) View species results
Alkaloid pathway 421 18 7DLGT (72) View species results
Phenylpropanoid pathway 407 11 POD (193) View species results
Flavonoid pathway 205 11 UFGT (132) View species results
Rosmarinic acid pathway 146 7 C4H (59) View species results
Steroid pathway 131 12 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1791 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
eruca_sativa_CAH8350792.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
eruca_sativa_CAH8353984.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
eruca_sativa_CAH8354602.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
eruca_sativa_CAH8382773.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
eruca_sativa_CAH8388152.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
eruca_sativa_CAH8391709.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
eruca_sativa_CAH8392617.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
eruca_sativa_CAH8392633.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
eruca_sativa_CAH8392636.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
eruca_sativa_CAH8392640.1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO