Eruca sativa (eruca_sativa)
/
Imported from atlas release summary for Eruca sativa.
1980
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1980
Candidate Genes
BAHD
7.59%
C4H
5.79%
C3'H/CYP98A
5.7%
POD
4.3%
CYP76
3.96%
IFS
3.94%
UGT
3.25%
4CL
3.15%
Other Families
62.32%
More Families (95)
T3O
145
3.04%
7DLGT
141
2.96%
UFGT
139
2.91%
F3H
131
2.75%
NMT
123
2.58%
DWF4/CYP90B1
119
2.5%
BR6OX2/CYP85A2
97
2.03%
F3'H/CYP75B
92
1.93%
STR
79
1.66%
CODM/T6ODM
77
1.61%
SGD
75
1.57%
SMT1/SMT2/SMT3
75
1.57%
CYP71
75
1.57%
H6H
65
1.36%
CAS
64
1.34%
TPS
63
1.32%
CSE
62
1.3%
TRI/TRII
53
1.11%
GES
53
1.11%
CAD
50
1.05%
PYKS
48
1.01%
SLS
47
0.99%
IFR
45
0.94%
T16H
44
0.92%
BBE
43
0.9%
LAMT
41
0.86%
COMT
41
0.86%
PAL
39
0.82%
F5H/CYP84A
39
0.82%
RAS
38
0.8%
LAC
37
0.78%
CYP90D1
36
0.75%
ANR
35
0.73%
TAT
35
0.73%
IO
32
0.67%
HCT
29
0.61%
G8O/G8H
27
0.57%
GS
26
0.55%
CCR
25
0.52%
16OMT
24
0.5%
8HGO
20
0.42%
FNS
20
0.42%
CPD/CYP90A1
19
0.4%
FPPS
19
0.4%
NCS
18
0.38%
F3'5'H/CYP75A
18
0.38%
BR6OX1/CYP85A1
18
0.38%
ANS/LDOX
17
0.36%
PMT
16
0.34%
GGPPS
15
0.31%
CYP51G1
14
0.29%
CPR
12
0.25%
SQE
12
0.25%
AACT
12
0.25%
CNMT
11
0.23%
7DLH
11
0.23%
CCoAOMT
11
0.23%
ROT3/CYP90C1
11
0.23%
MPO
10
0.21%
COR
10
0.21%
CHS
10
0.21%
DFR
10
0.21%
TYDC_DDC
9
0.19%
ISY
9
0.19%
CYP80B1
9
0.19%
DWF7
9
0.19%
CYP719
7
0.15%
SMO1/SMO2
7
0.15%
SQS/FDFT1
7
0.15%
MVD
7
0.15%
CYP80F1
6
0.13%
HPPR
6
0.13%
MVK
6
0.13%
XMT_MXMT_DXMT
5
0.1%
TDC
5
0.1%
CHI
5
0.1%
DET2
5
0.1%
HMGR
5
0.1%
FLS
4
0.08%
DXS
4
0.08%
IDI
4
0.08%
ADC
3
0.06%
HDS/IspG
3
0.06%
MCT/IspD
3
0.06%
FK
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
HYD1
2
0.04%
HDR/IspH
2
0.04%
PMK
2
0.04%
CMK/IspE
2
0.04%
DXR
2
0.04%
HMGS
2
0.04%
MDS/IspF
2
0.04%
DWF5
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 670 | 20 | BAHD (313) | View species results |
| Alkaloid pathway | 421 | 18 | 7DLGT (72) | View species results |
| Phenylpropanoid pathway | 407 | 11 | POD (193) | View species results |
| Flavonoid pathway | 205 | 11 | UFGT (132) | View species results |
| Rosmarinic acid pathway | 146 | 7 | C4H (59) | View species results |
| Steroid pathway | 131 | 12 | SMT1/SMT2/SMT3 (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1791 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 429 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| eruca_sativa_CAH8386184.1 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| eruca_sativa_CAH8386266.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| eruca_sativa_CAH8386936.1 | Alkaloid | NMT | low | borderline | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| eruca_sativa_CAH8387277.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| eruca_sativa_CAH8387386.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| eruca_sativa_CAH8387504.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| eruca_sativa_CAH8387967.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| eruca_sativa_CAH8388216.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| eruca_sativa_CAH8388288.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| eruca_sativa_CAH8388321.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| eruca_sativa_CAH8388688.1 | Alkaloid | NMT | medium | pass | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| eruca_sativa_CAH8388737.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| eruca_sativa_CAH8388829.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| eruca_sativa_CAH8388849.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| eruca_sativa_CAH8389269.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| eruca_sativa_CAH8389377.1 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| eruca_sativa_CAH8389595.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| eruca_sativa_CAH8389961.1 | Alkaloid | NMT | low | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| eruca_sativa_CAH8390377.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| eruca_sativa_CAH8390391.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| eruca_sativa_CAH8390714.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| eruca_sativa_CAH8391283.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| eruca_sativa_CAH8392134.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |