Eucalyptus grandis (eucalyptus_grandis)
Imported from atlas release summary for Eucalyptus grandis.
3837
Candidate Protein Records
3614
Pathway-Level Records
8581
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
8581
Family-Level Calls
C3'H/CYP98A
6.21%
C4H
5.93%
BAHD
5.1%
UGT
4.8%
7DLGT
4.64%
UFGT
4.58%
IFS
4.08%
CYP76
4.06%
Other Families
60.6%
More Families (97)
T3O
281
3.27%
4CL
264
3.08%
DWF4/CYP90B1
237
2.76%
F3H
234
2.73%
CAD
218
2.54%
POD
202
2.35%
F3'H/CYP75B
172
2.0%
NMT
146
1.7%
SMT1/SMT2/SMT3
130
1.51%
STR
129
1.5%
BR6OX2/CYP85A2
129
1.5%
GS
127
1.48%
H6H
122
1.42%
CAS
121
1.41%
CODM/T6ODM
118
1.38%
LAC
116
1.35%
IFR
114
1.33%
TPS
114
1.33%
GES
109
1.27%
COMT
104
1.21%
TRI/TRII
90
1.05%
CYP90D1
86
1.0%
CSE
85
0.99%
CYP71
79
0.92%
IO
76
0.89%
HCT
75
0.87%
7DLH
74
0.86%
NCS
71
0.83%
ANR
68
0.79%
PMT
65
0.76%
RAS
65
0.76%
TAT
64
0.75%
16OMT
58
0.68%
SLS
56
0.65%
G8O/G8H
54
0.63%
CYP51G1
53
0.62%
SGD
51
0.59%
LAMT
49
0.57%
T16H
46
0.54%
COR
45
0.52%
8HGO
45
0.52%
F3'5'H/CYP75A
44
0.51%
PYKS
41
0.48%
CCR
36
0.42%
CPD/CYP90A1
35
0.41%
FNS
34
0.4%
BBE
33
0.38%
PAL
33
0.38%
F5H/CYP84A
27
0.31%
CCoAOMT
27
0.31%
ROT3/CYP90C1
22
0.26%
CYP719
20
0.23%
BR6OX1/CYP85A1
19
0.22%
CHS
17
0.2%
CPR
17
0.2%
HPPR
15
0.17%
AACT
15
0.17%
CNMT
14
0.16%
DFR
14
0.16%
ANS/LDOX
13
0.15%
SQS/FDFT1
13
0.15%
MPO
12
0.14%
CHI
11
0.13%
TYDC_DDC
10
0.12%
SQE
10
0.12%
HMGR
9
0.1%
GGPPS
9
0.1%
FPPS
9
0.1%
6OMT_4OMT_SOMT
8
0.09%
FLS
8
0.09%
MCT/IspD
8
0.09%
DET2
7
0.08%
XMT_MXMT_DXMT
6
0.07%
MVD
6
0.07%
PMK
5
0.06%
FK
4
0.05%
IDI
4
0.05%
MVK
4
0.05%
DXS
4
0.05%
CPI1
3
0.03%
SMO1/SMO2
3
0.03%
DWF5
3
0.03%
HYD1
3
0.03%
CMK/IspE
3
0.03%
ISY
2
0.02%
TDC
2
0.02%
CYP80B1
2
0.02%
DWF7
2
0.02%
HDS/IspG
2
0.02%
HDR/IspH
2
0.02%
MDS/IspF
2
0.02%
ODC
1
0.01%
ADC
1
0.01%
DWF1
1
0.01%
DXR
1
0.01%
HMGS
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1029 | 19 | UGT (393) | View species results |
| Alkaloid pathway | 785 | 23 | 7DLGT (204) | View species results |
| Phenylpropanoid pathway | 714 | 11 | POD (195) | View species results |
| Flavonoid pathway | 582 | 13 | UFGT (376) | View species results |
| Rosmarinic acid pathway | 292 | 7 | C4H (127) | View species results |
| Steroid pathway | 212 | 13 | SMT1/SMT2/SMT3 (96) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 3252 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 578 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Egrascaffold_1640005120.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Egrascaffold_1640005130.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Egrascaffold_1640005140.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| Egrascaffold_17190005620.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_21370007870.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_25390009880.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Egrascaffold_25470009940.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Egrascaffold_26350010360.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_26350010360.2 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_26350010360.3 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_2810011140.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_3070012080.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_3370013300.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_34280013460.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| Egrascaffold_5710017890.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_6750019170.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_7210019660.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| Egrascaffold_7620020100.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |