Eucalyptus grandis (eucalyptus_grandis)
Imported from atlas release summary for Eucalyptus grandis.
3614
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3614
Candidate Genes
C3'H/CYP98A
6.21%
C4H
5.93%
BAHD
5.1%
UGT
4.8%
7DLGT
4.64%
UFGT
4.58%
IFS
4.08%
CYP76
4.06%
Other Families
60.6%
More Families (97)
T3O
281
3.27%
4CL
264
3.08%
DWF4/CYP90B1
237
2.76%
F3H
234
2.73%
CAD
218
2.54%
POD
202
2.35%
F3'H/CYP75B
172
2.0%
NMT
146
1.7%
SMT1/SMT2/SMT3
130
1.51%
STR
129
1.5%
BR6OX2/CYP85A2
129
1.5%
GS
127
1.48%
H6H
122
1.42%
CAS
121
1.41%
CODM/T6ODM
118
1.38%
LAC
116
1.35%
IFR
114
1.33%
TPS
114
1.33%
GES
109
1.27%
COMT
104
1.21%
TRI/TRII
90
1.05%
CYP90D1
86
1.0%
CSE
85
0.99%
CYP71
79
0.92%
IO
76
0.89%
HCT
75
0.87%
7DLH
74
0.86%
NCS
71
0.83%
ANR
68
0.79%
PMT
65
0.76%
RAS
65
0.76%
TAT
64
0.75%
16OMT
58
0.68%
SLS
56
0.65%
G8O/G8H
54
0.63%
CYP51G1
53
0.62%
SGD
51
0.59%
LAMT
49
0.57%
T16H
46
0.54%
COR
45
0.52%
8HGO
45
0.52%
F3'5'H/CYP75A
44
0.51%
PYKS
41
0.48%
CCR
36
0.42%
CPD/CYP90A1
35
0.41%
FNS
34
0.4%
BBE
33
0.38%
PAL
33
0.38%
F5H/CYP84A
27
0.31%
CCoAOMT
27
0.31%
ROT3/CYP90C1
22
0.26%
CYP719
20
0.23%
BR6OX1/CYP85A1
19
0.22%
CHS
17
0.2%
CPR
17
0.2%
HPPR
15
0.17%
AACT
15
0.17%
CNMT
14
0.16%
DFR
14
0.16%
ANS/LDOX
13
0.15%
SQS/FDFT1
13
0.15%
MPO
12
0.14%
CHI
11
0.13%
TYDC_DDC
10
0.12%
SQE
10
0.12%
HMGR
9
0.1%
GGPPS
9
0.1%
FPPS
9
0.1%
6OMT_4OMT_SOMT
8
0.09%
FLS
8
0.09%
MCT/IspD
8
0.09%
DET2
7
0.08%
XMT_MXMT_DXMT
6
0.07%
MVD
6
0.07%
PMK
5
0.06%
FK
4
0.05%
IDI
4
0.05%
MVK
4
0.05%
DXS
4
0.05%
CPI1
3
0.03%
SMO1/SMO2
3
0.03%
DWF5
3
0.03%
HYD1
3
0.03%
CMK/IspE
3
0.03%
ISY
2
0.02%
TDC
2
0.02%
CYP80B1
2
0.02%
DWF7
2
0.02%
HDS/IspG
2
0.02%
HDR/IspH
2
0.02%
MDS/IspF
2
0.02%
ODC
1
0.01%
ADC
1
0.01%
DWF1
1
0.01%
DXR
1
0.01%
HMGS
1
0.01%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1029 | 19 | UGT (393) | View species results |
| Alkaloid pathway | 785 | 23 | 7DLGT (204) | View species results |
| Phenylpropanoid pathway | 714 | 11 | POD (195) | View species results |
| Flavonoid pathway | 582 | 13 | UFGT (376) | View species results |
| Rosmarinic acid pathway | 292 | 7 | C4H (127) | View species results |
| Steroid pathway | 212 | 13 | SMT1/SMT2/SMT3 (96) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 3252 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 578 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Egra11G0012890.2 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| Egra11G0021690.1 | Steroid | CAS | medium | pass | CAS__00012__sp_Q9FN48_CAS_ARATH |
| Egra11G0021690.2 | Steroid | CAS | medium | pass | CAS__00012__sp_Q9FN48_CAS_ARATH |
| Egra11G0021690.3 | Steroid | CAS | medium | pass | CAS__00012__sp_Q9FN48_CAS_ARATH |
| Egra11G0021690.4 | Steroid | CAS | medium | pass | CAS__00012__sp_Q9FN48_CAS_ARATH |
| Egra11G0029480.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_11080000880.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_17190005620.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_21370007870.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_21730008040.1 | Steroid | CAS | medium | pass | CAS__00007__sp_Q43153_CYSC_SPIOL |
| Egrascaffold_26350010360.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_26350010360.2 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_26350010360.3 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_26820010560.1 | Steroid | CAS | medium | pass | CAS__00009__sp_Q6Z2X6_CAS_ORYSJ |
| Egrascaffold_2810011140.1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_2850011230.1 | Steroid | CAS | medium | pass | CAS__00013__sp_Q9SLP9_CAS1_LUFAE |
| Egrascaffold_3370013300.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_5710017890.1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_6750019170.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_7620020100.1 | Steroid | CAS | medium | pass | CAS__00003__sp_H8ZM73_CAS_ABIBA |
| Egrascaffold_8870021210.1 | Steroid | CAS | low | borderline | CAS__00003__sp_H8ZM73_CAS_ABIBA |