PlantSME Plant secondary metabolism enzyme database

Fagopyrum tataricum (fagopyrum_tataricum)

Imported from atlas release summary for Fagopyrum tataricum.

1778
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.57% Alkaloid pathway 22.67% Phenylpropanoid pathway 21.15% Flavonoid pathway 12.77% Rosmarinic acid pathway 9.79% Steroid pathway 5.06%
Family Distribution
C4H 6.51% C3'H/CYP98A 5.95% BAHD 5.58% UGT 4.6% CYP76 4.5% 7DLGT 4.21% POD 4.16% IFS 4.09%
Other Families 60.41%
More Families (97)
UFGT 167 4.09% T3O 152 3.72% F3H 114 2.79% 4CL 106 2.59% DWF4/CYP90B1 90 2.2% NMT 85 2.08% CAD 77 1.88% STR 76 1.86% CODM/T6ODM 73 1.79% BR6OX2/CYP85A2 73 1.79% F3'H/CYP75B 60 1.47% SMT1/SMT2/SMT3 57 1.39% RAS 47 1.15% TPS 46 1.13% PYKS 43 1.05% CAS 43 1.05% H6H 41 1.0% GES 40 0.98% LAC 40 0.98% TRI/TRII 39 0.95% ANR 39 0.95% COMT 39 0.95% HCT 37 0.91% CSE 37 0.91% SGD 36 0.88% T16H 36 0.88% G8O/G8H 35 0.86% CYP71 35 0.86% IFR 34 0.83% CYP90D1 33 0.81% CCR 31 0.76% CPD/CYP90A1 31 0.76% GS 29 0.71% TAT 29 0.71% PAL 24 0.59% 16OMT 23 0.56% BBE 23 0.56% F3'5'H/CYP75A 23 0.56% COR 22 0.54% SLS 20 0.49% PMT 20 0.49% 8HGO 20 0.49% CHS 19 0.46% IO 17 0.42% 7DLH 15 0.37% ROT3/CYP90C1 15 0.37% CNMT 14 0.34% FPPS 14 0.34% DFR 12 0.29% FNS 12 0.29% F5H/CYP84A 11 0.27% CYP51G1 11 0.27% NCS 10 0.24% LAMT 10 0.24% SQS/FDFT1 10 0.24% XMT_MXMT_DXMT 9 0.22% ISY 9 0.22% TYDC_DDC 8 0.2% HPPR 8 0.2% 6OMT_4OMT_SOMT 7 0.17% ANS/LDOX 7 0.17% CCoAOMT 7 0.17% BR6OX1/CYP85A1 7 0.17% CYP80B1 6 0.15% CPR 6 0.15% GGPPS 6 0.15% AACT 6 0.15% MVK 6 0.15% MPO 5 0.12% ODC 5 0.12% ADC 5 0.12% HMGR 5 0.12% TDC 4 0.1% CYP719 4 0.1% CHI 4 0.1% SQE 4 0.1% DET2 4 0.1% SMO1/SMO2 4 0.1% MVD 4 0.1% CYP80F1 3 0.07% CPI1 3 0.07% HYD1 3 0.07% HMGS 3 0.07% DXS 3 0.07% DWF1 2 0.05% IDI 2 0.05% MDS/IspF 2 0.05% HDS/IspG 2 0.05% HDR/IspH 2 0.05% DXR 2 0.05% FK 1 0.02% DWF7 1 0.02% DWF5 1 0.02% MCT/IspD 1 0.02% PMK 1 0.02% GPPS 1 0.02% CMK/IspE 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (179) View species results
Alkaloid pathway 403 22 7DLGT (85) View species results
Phenylpropanoid pathway 376 12 POD (167) View species results
Flavonoid pathway 227 12 UFGT (152) View species results
Rosmarinic acid pathway 174 7 C4H (92) View species results
Steroid pathway 90 12 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1537 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 312 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: XMT_MXMT_DXMT
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Gene Pathway Family Confidence Status Best Target
FtPinG0001447800.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00001__sp_A0A0S2PM82_TCS3_CAMSI
FtPinG0004278700.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00002__sp_A0A0S2PM92_TCS1F_CAMCR
FtPinG0005415600.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
FtPinG0005416000.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
FtPinG0005417200.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
FtPinG0006544400.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00010__sp_Q9FZN8_TCS1_CAMSI
FtPinG0006663000.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
FtPinG0006663400.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA
FtPinG0006664000.01.T01 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA