Fortunella hindsii (fortunella_hindsii)
/
Imported from atlas release summary for Fortunella hindsii.
1751
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1751
Candidate Genes
BAHD
5.97%
C4H
5.9%
C3'H/CYP98A
5.77%
4CL
4.68%
CYP76
4.23%
IFS
3.82%
UGT
3.78%
7DLGT
3.35%
Other Families
62.51%
More Families (97)
UFGT
147
3.32%
F3H
141
3.19%
T3O
135
3.05%
POD
132
2.99%
NMT
106
2.4%
BR6OX2/CYP85A2
99
2.24%
CODM/T6ODM
96
2.17%
DWF4/CYP90B1
92
2.08%
F3'H/CYP75B
80
1.81%
CAS
77
1.74%
STR
67
1.52%
CAD
59
1.33%
G8O/G8H
56
1.27%
COMT
56
1.27%
SMT1/SMT2/SMT3
55
1.24%
H6H
54
1.22%
HCT
53
1.2%
TPS
53
1.2%
GES
50
1.13%
IFR
47
1.06%
TAT
46
1.04%
RAS
43
0.97%
PYKS
38
0.86%
CYP71
37
0.84%
GS
36
0.81%
TRI/TRII
36
0.81%
CYP90D1
35
0.79%
T16H
33
0.75%
16OMT
33
0.75%
FNS
33
0.75%
LAMT
31
0.7%
SGD
28
0.63%
7DLH
28
0.63%
CSE
28
0.63%
CCR
26
0.59%
ANR
25
0.57%
F5H/CYP84A
25
0.57%
CPD/CYP90A1
25
0.57%
IO
24
0.54%
F3'5'H/CYP75A
22
0.5%
PMT
21
0.47%
ISY
21
0.47%
NCS
21
0.47%
SLS
21
0.47%
PAL
21
0.47%
CNMT
20
0.45%
COR
19
0.43%
8HGO
19
0.43%
FPPS
19
0.43%
GGPPS
19
0.43%
DFR
16
0.36%
CHS
15
0.34%
TYDC_DDC
14
0.32%
AACT
14
0.32%
LAC
13
0.29%
HPPR
13
0.29%
CYP80B1
12
0.27%
ANS/LDOX
11
0.25%
BR6OX1/CYP85A1
11
0.25%
ODC
10
0.23%
CCoAOMT
10
0.23%
MPO
9
0.2%
CYP719
8
0.18%
SQE
8
0.18%
CYP51G1
8
0.18%
HYD1
7
0.16%
SQS/FDFT1
6
0.14%
MVK
6
0.14%
MVD
6
0.14%
CPR
5
0.11%
ROT3/CYP90C1
5
0.11%
DXS
5
0.11%
MCT/IspD
5
0.11%
DXR
5
0.11%
BBE
4
0.09%
6OMT_4OMT_SOMT
4
0.09%
FLS
4
0.09%
CHI
4
0.09%
MDS/IspF
4
0.09%
DWF7
3
0.07%
HDS/IspG
3
0.07%
HDR/IspH
3
0.07%
TDC
2
0.05%
XMT_MXMT_DXMT
2
0.05%
FK
2
0.05%
DWF1
2
0.05%
SMO1/SMO2
2
0.05%
DET2
2
0.05%
HMGR
2
0.05%
CMK/IspE
2
0.05%
HMGS
2
0.05%
PMK
2
0.05%
ADC
1
0.02%
DWF5
1
0.02%
CPI1
1
0.02%
GPPS
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 530 | 20 | BAHD (217) | View species results |
| Alkaloid pathway | 376 | 25 | 7DLGT (58) | View species results |
| Phenylpropanoid pathway | 324 | 11 | POD (118) | View species results |
| Flavonoid pathway | 214 | 8 | UFGT (121) | View species results |
| Rosmarinic acid pathway | 184 | 7 | C4H (51) | View species results |
| Steroid pathway | 123 | 12 | CAS (61) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1628 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 360 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| fortunella_hindsii_sjg027060.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg028510.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg043500.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg047260.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg047280.1 | Alkaloid | SLS | low | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg070460.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg116890.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg136190.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg136210.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg136310.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg152500.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg209490.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg210110.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg216700.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg216730.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg259450.1 | Alkaloid | SLS | medium | pass | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg285460.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg295070.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| fortunella_hindsii_sjg296210.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg296960.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| fortunella_hindsii_sjg305650.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |