PlantSME Plant secondary metabolism enzyme database

Fortunella hindsii (fortunella_hindsii)

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Imported from atlas release summary for Fortunella hindsii.

2104
Candidate Protein Records
1751
Pathway-Level Records
4422
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.27% Alkaloid pathway 21.47% Phenylpropanoid pathway 18.5% Flavonoid pathway 12.22% Rosmarinic acid pathway 10.51% Steroid pathway 7.02%
Family Distribution
BAHD 5.97% C4H 5.9% C3'H/CYP98A 5.77% 4CL 4.68% CYP76 4.23% IFS 3.82% UGT 3.78% 7DLGT 3.35%
Other Families 62.51%
More Families (97)
UFGT 147 3.32% F3H 141 3.19% T3O 135 3.05% POD 132 2.99% NMT 106 2.4% BR6OX2/CYP85A2 99 2.24% CODM/T6ODM 96 2.17% DWF4/CYP90B1 92 2.08% F3'H/CYP75B 80 1.81% CAS 77 1.74% STR 67 1.52% CAD 59 1.33% G8O/G8H 56 1.27% COMT 56 1.27% SMT1/SMT2/SMT3 55 1.24% H6H 54 1.22% HCT 53 1.2% TPS 53 1.2% GES 50 1.13% IFR 47 1.06% TAT 46 1.04% RAS 43 0.97% PYKS 38 0.86% CYP71 37 0.84% GS 36 0.81% TRI/TRII 36 0.81% CYP90D1 35 0.79% T16H 33 0.75% 16OMT 33 0.75% FNS 33 0.75% LAMT 31 0.7% SGD 28 0.63% 7DLH 28 0.63% CSE 28 0.63% CCR 26 0.59% ANR 25 0.57% F5H/CYP84A 25 0.57% CPD/CYP90A1 25 0.57% IO 24 0.54% F3'5'H/CYP75A 22 0.5% PMT 21 0.47% ISY 21 0.47% NCS 21 0.47% SLS 21 0.47% PAL 21 0.47% CNMT 20 0.45% COR 19 0.43% 8HGO 19 0.43% FPPS 19 0.43% GGPPS 19 0.43% DFR 16 0.36% CHS 15 0.34% TYDC_DDC 14 0.32% AACT 14 0.32% LAC 13 0.29% HPPR 13 0.29% CYP80B1 12 0.27% ANS/LDOX 11 0.25% BR6OX1/CYP85A1 11 0.25% ODC 10 0.23% CCoAOMT 10 0.23% MPO 9 0.2% CYP719 8 0.18% SQE 8 0.18% CYP51G1 8 0.18% HYD1 7 0.16% SQS/FDFT1 6 0.14% MVK 6 0.14% MVD 6 0.14% CPR 5 0.11% ROT3/CYP90C1 5 0.11% DXS 5 0.11% MCT/IspD 5 0.11% DXR 5 0.11% BBE 4 0.09% 6OMT_4OMT_SOMT 4 0.09% FLS 4 0.09% CHI 4 0.09% MDS/IspF 4 0.09% DWF7 3 0.07% HDS/IspG 3 0.07% HDR/IspH 3 0.07% TDC 2 0.05% XMT_MXMT_DXMT 2 0.05% FK 2 0.05% DWF1 2 0.05% SMO1/SMO2 2 0.05% DET2 2 0.05% HMGR 2 0.05% CMK/IspE 2 0.05% HMGS 2 0.05% PMK 2 0.05% ADC 1 0.02% DWF5 1 0.02% CPI1 1 0.02% GPPS 1 0.02% IDI 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 530 20 BAHD (217) View species results
Alkaloid pathway 376 25 7DLGT (58) View species results
Phenylpropanoid pathway 324 11 POD (118) View species results
Flavonoid pathway 214 8 UFGT (121) View species results
Rosmarinic acid pathway 184 7 C4H (51) View species results
Steroid pathway 123 12 CAS (61) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1628 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 360 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
fortunella_hindsii_sjg218000.1 Alkaloid TYDC_DDC medium borderline
fortunella_hindsii_sjg233900.1 Alkaloid TYDC_DDC low borderline
fortunella_hindsii_sjg262060.1 Alkaloid TYDC_DDC medium borderline
fortunella_hindsii_sjg262070.1 Alkaloid TYDC_DDC medium borderline
fortunella_hindsii_sjg291090.1 Alkaloid TYDC_DDC medium borderline
fortunella_hindsii_sjg068570.1 Alkaloid XMT_MXMT_DXMT low borderline
fortunella_hindsii_sjg200160.1 Alkaloid XMT_MXMT_DXMT medium borderline