PlantSME Plant secondary metabolism enzyme database

Gackstroemia magellanica (gackstroemia_magellanica)

Imported from atlas release summary for Gackstroemia magellanica.

644
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 186 11 POD (86) View species results
Terpenoid pathway 145 19 BAHD (58) View species results
Alkaloid pathway 134 16 GS (25) View species results
Flavonoid pathway 77 10 UFGT (24) View species results
Rosmarinic acid pathway 63 7 C4H (19) View species results
Steroid pathway 39 11 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 536 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 154 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
Gmag3716390003900 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Gmag3730460005550 Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
Gmag3879930010400 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag4296500019370 Phenylpropanoid CAD medium pass CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR
Gmag4453400025340 Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Gmag4472710027460 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
Gmag4496100029270 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Gmag5032760045090 Phenylpropanoid CAD medium pass CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR
Gmag5307650047310 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Gmag5338500050070 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Gmag5405030053790 Phenylpropanoid CAD medium pass CAD__00011__sp_Q02971_CADH7_ARATH
Gmag5564820060380 Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag5747810076580 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
Gmag5939270101930 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Gmag5947640104340 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Gmag5972330111010 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
Gmag5999920115550 Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Gmag6004570116820 Phenylpropanoid CAD low borderline CAD__00004__sp_B5LAT8_CAD1_CAPAN
Gmag6018680119880 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Gmag6076880136720 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag6076880136730 Phenylpropanoid CAD medium pass CAD__00003__sp_A0A2P1GIW4_REDX1_CATRO
Gmag6148460167750 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag6162710175000 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
Gmag6202120193580 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag6202840193930 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Gmag6202840193960 Phenylpropanoid CAD medium pass CAD__00010__sp_P48523_CADH4_ARATH
Gmag6225580203300 Phenylpropanoid CAD medium pass CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR
Gmag6233910207100 Phenylpropanoid CAD low borderline CAD__00013__sp_Q0JA75_CADH7_ORYSJ
Gmag6240030209560 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag6248030212770 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
Gmag6252860214170 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Gmag6546240222130 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag6546250222140 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Gmag6558630222370 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Gmag6558640222390 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Gmag6850680225560 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH
Gmag6850690225660 Phenylpropanoid CAD medium pass CAD__00012__sp_Q02972_CADH8_ARATH