Gackstroemia magellanica (gackstroemia_magellanica)
Imported from atlas release summary for Gackstroemia magellanica.
644
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
644
Candidate Genes
4CL
6.93%
BAHD
5.78%
POD
5.2%
C3'H/CYP98A
5.08%
C4H
4.79%
STR
3.52%
GS
3.29%
IFS
3.18%
Other Families
62.22%
More Families (92)
CYP76
55
3.18%
NMT
51
2.95%
T3O
41
2.37%
TRI/TRII
41
2.37%
IFR
41
2.37%
CAD
37
2.14%
F3H
36
2.08%
DWF4/CYP90B1
35
2.02%
HCT
31
1.79%
BR6OX2/CYP85A2
30
1.73%
F3'H/CYP75B
28
1.62%
UGT
27
1.56%
UFGT
26
1.5%
7DLGT
25
1.44%
H6H
24
1.39%
RAS
23
1.33%
LAC
19
1.1%
TPS
19
1.1%
PAL
18
1.04%
CAS
17
0.98%
CODM/T6ODM
16
0.92%
TAT
16
0.92%
T16H
15
0.87%
IO
15
0.87%
F3'5'H/CYP75A
15
0.87%
COMT
15
0.87%
CSE
14
0.81%
SMT1/SMT2/SMT3
14
0.81%
DFR
13
0.75%
SLS
12
0.69%
CCR
12
0.69%
GGPPS
12
0.69%
GES
11
0.64%
G8O/G8H
11
0.64%
COR
11
0.64%
CYP90D1
11
0.64%
8HGO
10
0.58%
CNMT
10
0.58%
PYKS
10
0.58%
SGD
10
0.58%
CPD/CYP90A1
10
0.58%
ANR
9
0.52%
PMT
8
0.46%
LAMT
8
0.46%
CPR
8
0.46%
HPPR
8
0.46%
NCS
7
0.4%
CHS
7
0.4%
CCoAOMT
6
0.35%
BR6OX1/CYP85A1
6
0.35%
CYP51G1
6
0.35%
CYP71
6
0.35%
AACT
6
0.35%
MPO
5
0.29%
CYP719
5
0.29%
FNS
5
0.29%
CYP80B1
4
0.23%
6OMT_4OMT_SOMT
4
0.23%
ANS/LDOX
4
0.23%
SQE
4
0.23%
SQS/FDFT1
4
0.23%
MVK
4
0.23%
7DLH
3
0.17%
16OMT
3
0.17%
ADC
3
0.17%
CHI
3
0.17%
DWF1
3
0.17%
SMO1/SMO2
3
0.17%
DWF5
3
0.17%
DET2
3
0.17%
HMGR
3
0.17%
MVD
3
0.17%
MCT/IspD
3
0.17%
HDR/IspH
3
0.17%
CMK/IspE
3
0.17%
BBE
2
0.12%
HYD1
2
0.12%
CPI1
2
0.12%
DWF7
2
0.12%
IDI
2
0.12%
DXS
2
0.12%
FPPS
2
0.12%
DXR
2
0.12%
HDS/IspG
2
0.12%
PMK
2
0.12%
ODC
1
0.06%
TYDC_DDC
1
0.06%
TDC
1
0.06%
F5H/CYP84A
1
0.06%
FK
1
0.06%
ROT3/CYP90C1
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 186 | 11 | POD (86) | View species results |
| Terpenoid pathway | 145 | 19 | BAHD (58) | View species results |
| Alkaloid pathway | 134 | 16 | GS (25) | View species results |
| Flavonoid pathway | 77 | 10 | UFGT (24) | View species results |
| Rosmarinic acid pathway | 63 | 7 | C4H (19) | View species results |
| Steroid pathway | 39 | 11 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 536 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 154 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gmag3577450002620 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Gmag3615020002940 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Gmag3849100007640 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmag3952730013530 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmag4368240022320 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Gmag4854940035790 | Alkaloid | NMT | medium | borderline | NMT__00014__sp_C3SBW0_PNMT_THLFG |
| Gmag5342790050410 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmag5594180064900 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmag5628330069910 | Alkaloid | NMT | low | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Gmag5753510077550 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Gmag5779810080870 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmag5818440085110 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Gmag5839660088670 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Gmag5864750093470 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Gmag5962940108520 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gmag5974980111620 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Gmag5997260114560 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmag6015630118650 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Gmag6022960121020 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Gmag6059890131360 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Gmag6076410136670 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmag6079260137920 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Gmag6080870138900 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmag6085620140400 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Gmag6093470143460 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gmag6111870151300 | Alkaloid | NMT | low | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Gmag6126840157760 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmag6145210165830 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gmag6147850167230 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Gmag6151820169510 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Gmag6155190171320 | Alkaloid | NMT | low | borderline | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Gmag6162460174920 | Alkaloid | NMT | medium | borderline | NMT__00051__sp_Q96565_AMNMT_HORVV |
| Gmag6163910175590 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Gmag6169530177920 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Gmag6183370184600 | Alkaloid | NMT | low | borderline | NMT__00019__sp_O22781_SUVH2_ARATH |
| Gmag6186480185990 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Gmag6189020187220 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Gmag6203120194180 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmag6207680196130 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Gmag6209610196640 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gmag6216250199450 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmag6224100202640 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Gmag6225540203260 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Gmag6239410209270 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Gmag6248990213020 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Gmag6681880224630 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmag6681890224640 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmag6681900224650 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmag6681910224660 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Gmag6854380225910 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |