PlantSME Plant secondary metabolism enzyme database

Gackstroemia magellanica (gackstroemia_magellanica)

Imported from atlas release summary for Gackstroemia magellanica.

976
Candidate Protein Records
644
Pathway-Level Records
1731
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 186 11 POD (86) View species results
Terpenoid pathway 145 19 BAHD (58) View species results
Alkaloid pathway 134 16 GS (25) View species results
Flavonoid pathway 77 10 UFGT (24) View species results
Rosmarinic acid pathway 63 7 C4H (19) View species results
Steroid pathway 39 11 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 536 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 154 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Gmag5452680058180 Alkaloid TRI/TRII medium pass
Gmag5565920060810 Alkaloid TRI/TRII medium pass
Gmag5567220061230 Alkaloid TRI/TRII medium pass
Gmag5586540063430 Alkaloid TRI/TRII low borderline
Gmag5661450073930 Alkaloid TRI/TRII low borderline
Gmag5717060075370 Alkaloid TRI/TRII low borderline
Gmag5829870087350 Alkaloid TRI/TRII medium pass
Gmag5912260097550 Alkaloid TRI/TRII medium pass
Gmag5992810113630 Alkaloid TRI/TRII low borderline
Gmag6029500123170 Alkaloid TRI/TRII low borderline
Gmag6048330127800 Alkaloid TRI/TRII medium pass
Gmag6054440129280 Alkaloid TRI/TRII low borderline
Gmag6065050133010 Alkaloid TRI/TRII low borderline
Gmag6088600141880 Alkaloid TRI/TRII medium pass
Gmag6106580148460 Alkaloid TRI/TRII medium pass
Gmag6108670149710 Alkaloid TRI/TRII medium pass
Gmag6118160153580 Alkaloid TRI/TRII low borderline
Gmag6140710164070 Alkaloid TRI/TRII medium pass
Gmag6165940176540 Alkaloid TRI/TRII medium pass
Gmag6172900179760 Alkaloid TRI/TRII medium pass
Gmag6174810180540 Alkaloid TRI/TRII medium pass
Gmag6174810180550 Alkaloid TRI/TRII medium pass
Gmag6187010186270 Alkaloid TRI/TRII medium pass
Gmag6190790188110 Alkaloid TRI/TRII low borderline
Gmag6198300191860 Alkaloid TRI/TRII medium pass
Gmag6198300191870 Alkaloid TRI/TRII medium pass
Gmag6198300191880 Alkaloid TRI/TRII medium pass
Gmag6198650192010 Alkaloid TRI/TRII medium pass
Gmag6199160192250 Alkaloid TRI/TRII medium pass
Gmag6199160192260 Alkaloid TRI/TRII medium pass
Gmag6205830195250 Alkaloid TRI/TRII medium pass
Gmag6206290195570 Alkaloid TRI/TRII low borderline
Gmag6230370205420 Alkaloid TRI/TRII low borderline
Gmag6243320211050 Alkaloid TRI/TRII low borderline
Gmag6243520211130 Alkaloid TRI/TRII medium pass
Gmag6065440133150 Alkaloid TYDC_DDC low borderline