PlantSME Plant secondary metabolism enzyme database

Galdieria sulphuraria (galdieria_sulphuraria)

Imported from atlas release summary for Galdieria sulphuraria.

106
Candidate Genes
76
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 33.96% Alkaloid pathway 21.7% Phenylpropanoid pathway 16.98% Steroid pathway 13.21% Rosmarinic acid pathway 11.32% Flavonoid pathway 2.83%
Family Distribution
4CL 12.29% BAHD 6.14% CNMT 5.46% IFR 5.12% GS 4.78% STR 4.44% POD 4.1% NMT 3.75%
Other Families 53.92%
More Families (68)
TRI/TRII 7 2.39% C3'H/CYP98A 7 2.39% CYP71 7 2.39% C4H 6 2.05% CAD 6 2.05% TAT 6 2.05% CPR 5 1.71% SMT1/SMT2/SMT3 5 1.71% CYP76 5 1.71% T16H 4 1.37% FNS 4 1.37% DWF4/CYP90B1 4 1.37% PMT 3 1.02% T3O 3 1.02% MPO 3 1.02% 8HGO 3 1.02% IFS 3 1.02% HPPR 3 1.02% SQS/FDFT1 3 1.02% CAS 3 1.02% DET2 3 1.02% FPPS 3 1.02% GGPPS 3 1.02% CYP80B1 2 0.68% COR 2 0.68% ODC 2 0.68% 6OMT_4OMT_SOMT 2 0.68% CYP80F1 2 0.68% IO 2 0.68% ANR 2 0.68% HYD1 2 0.68% SMO1/SMO2 2 0.68% HMGS 2 0.68% HMGR 2 0.68% AACT 2 0.68% MCT/IspD 2 0.68% MVD 2 0.68% 16OMT 1 0.34% PYKS 1 0.34% LAMT 1 0.34% 7DLGT 1 0.34% SLS 1 0.34% H6H 1 0.34% FLS 1 0.34% UFGT 1 0.34% F3H 1 0.34% COMT 1 0.34% CCoAOMT 1 0.34% F5H/CYP84A 1 0.34% CCR 1 0.34% FK 1 0.34% CYP90D1 1 0.34% SQE 1 0.34% CYP51G1 1 0.34% DWF1 1 0.34% CPI1 1 0.34% BR6OX1/CYP85A1 1 0.34% ROT3/CYP90C1 1 0.34% MDS/IspF 1 0.34% HDR/IspH 1 0.34% MVK 1 0.34% HDS/IspG 1 0.34% CMK/IspE 1 0.34% DXS 1 0.34% IDI 1 0.34% PMK 1 0.34% DXR 1 0.34% UGT 1 0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 36 16 BAHD (14) View species results
Alkaloid pathway 23 9 GS (7) View species results
Phenylpropanoid pathway 18 3 POD (12) View species results
Steroid pathway 14 8 SMT1/SMT2/SMT3 (4) View species results
Rosmarinic acid pathway 12 4 TAT (5) View species results
Flavonoid pathway 3 1 4CL (3) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 17 51 BR6OX1/CYP85A1, C3'H/CYP98A, C4H, CYP51G1, CYP71, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F5H/CYP84A, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 1 18 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status Best Target
Gsulscaf_150011450.1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Gsulscaf_20017550.1 Rosmarinic Acid TAT low borderline TAT__00003__sp_Q9LVY1_TAT_ARATH
Gsulscaf_450045460.1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Gsulscaf_590055750.1 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Gsulscaf_590055750.2 Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
Gsulscaf_80063990.1 Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH