Gillenia trifoliata (gillenia_trifoliata)
/
Imported from atlas release summary for Gillenia trifoliata.
1130
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1130
Candidate Genes
BAHD
5.7%
C4H
5.63%
C3'H/CYP98A
5.31%
POD
3.99%
UGT
3.85%
IFS
3.77%
UFGT
3.7%
F3H
3.67%
Other Families
64.39%
More Families (94)
7DLGT
102
3.63%
4CL
99
3.53%
CYP76
95
3.38%
H6H
80
2.85%
T3O
79
2.81%
DWF4/CYP90B1
71
2.53%
NMT
58
2.07%
STR
54
1.92%
CODM/T6ODM
41
1.46%
F3'H/CYP75B
41
1.46%
BR6OX2/CYP85A2
40
1.42%
CAS
40
1.42%
CAD
38
1.35%
LAC
38
1.35%
SGD
36
1.28%
TRI/TRII
32
1.14%
TAT
32
1.14%
CYP71
32
1.14%
HCT
31
1.1%
CSE
31
1.1%
SMT1/SMT2/SMT3
31
1.1%
T16H
28
1.0%
IFR
28
1.0%
PYKS
26
0.93%
RAS
26
0.93%
TPS
23
0.82%
GS
21
0.75%
LAMT
21
0.75%
PAL
21
0.75%
BR6OX1/CYP85A1
21
0.75%
COMT
20
0.71%
G8O/G8H
19
0.68%
PMT
19
0.68%
SLS
19
0.68%
GES
18
0.64%
7DLH
18
0.64%
ANR
18
0.64%
IO
17
0.61%
CPR
17
0.61%
CYP90D1
17
0.61%
CCR
16
0.57%
FPPS
16
0.57%
F5H/CYP84A
15
0.53%
GGPPS
14
0.5%
16OMT
13
0.46%
F3'5'H/CYP75A
13
0.46%
COR
12
0.43%
NCS
12
0.43%
ROT3/CYP90C1
11
0.39%
8HGO
10
0.36%
CHS
10
0.36%
FNS
10
0.36%
CPD/CYP90A1
10
0.36%
AACT
10
0.36%
DFR
8
0.28%
MPO
7
0.25%
CNMT
7
0.25%
BBE
7
0.25%
SQE
7
0.25%
ISY
6
0.21%
ANS/LDOX
6
0.21%
DXS
6
0.21%
CYP80B1
5
0.18%
CHI
5
0.18%
CCoAOMT
5
0.18%
SQS/FDFT1
5
0.18%
CYP719
4
0.14%
TYDC_DDC
4
0.14%
HPPR
4
0.14%
SMO1/SMO2
4
0.14%
CYP51G1
4
0.14%
DET2
4
0.14%
MVD
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
ADC
2
0.07%
HYD1
2
0.07%
CPI1
2
0.07%
HMGS
2
0.07%
CMK/IspE
2
0.07%
PMK
2
0.07%
HMGR
2
0.07%
XMT_MXMT_DXMT
1
0.04%
FK
1
0.04%
DWF1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HDR/IspH
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
IDI
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 314 | 19 | BAHD (127) | View species results |
| Phenylpropanoid pathway | 247 | 11 | POD (108) | View species results |
| Alkaloid pathway | 243 | 17 | 7DLGT (46) | View species results |
| Flavonoid pathway | 147 | 8 | UFGT (92) | View species results |
| Rosmarinic acid pathway | 104 | 7 | C4H (30) | View species results |
| Steroid pathway | 75 | 13 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 972 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 217 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gt00001166 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00001743 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00003614 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00003705 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00003816 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00005131 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00005695 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00005892 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00006211 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00007762 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00008391 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00008689 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00008821 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00009363 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00009820 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00012211 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00012314 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00012461 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Gt00012552 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00012602 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00012676 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00015230 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00018156 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00018393 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Gt00018643 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00018736 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Gt00018775 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00022227 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00022734 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00024975 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00025521 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00025638 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00026726 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00027333 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00027439 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00027509 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00029562 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00029733 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00030371 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Gt00031682 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00032337 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00032835 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Gt00032924 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Gt00033529 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| Gt00033539 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00033962 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00034459 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00034823 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00035220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Gt00037352 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |