PlantSME Plant secondary metabolism enzyme database

Glycine soja (glycine_soja)

Imported from atlas release summary for Glycine soja.

3766
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 992 20 BAHD (438) View species results
Phenylpropanoid pathway 901 12 POD (400) View species results
Alkaloid pathway 859 24 NMT (189) View species results
Flavonoid pathway 435 11 UFGT (255) View species results
Rosmarinic acid pathway 292 7 C4H (90) View species results
Steroid pathway 287 13 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2884 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 714 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Gsoj17G0005880.1 Alkaloid PMT low borderline
Gsoj17G0005890.1 Alkaloid PMT low borderline
Gsoj17G0008810.1 Alkaloid PMT medium borderline
Gsoj17G0008930.1 Alkaloid PMT medium borderline
Gsoj17G0008930.2 Alkaloid PMT medium borderline
Gsoj17G0008930.3 Alkaloid PMT medium borderline
Gsoj17G0008930.4 Alkaloid PMT medium borderline
Gsoj17G0008930.5 Alkaloid PMT medium borderline
Gsoj17G0022510.1 Alkaloid PMT medium pass
Gsoj18G0005540.1 Alkaloid PMT low borderline
Gsoj18G0013250.1 Alkaloid PMT medium borderline
Gsoj18G0013580.1 Alkaloid PMT low borderline
Gsoj19G0009930.1 Alkaloid PMT low borderline
Gsoj19G0022330.1 Alkaloid PMT medium pass
Gsoj19G0024350.1 Alkaloid PMT medium pass
Gsoj19G0024360.1 Alkaloid PMT medium pass
Gsoj20G0014500.1 Alkaloid PMT medium pass
Gsoj20G0014500.2 Alkaloid PMT medium pass