Glycine soja (glycine_soja)
Imported from atlas release summary for Glycine soja.
4798
Candidate Protein Records
3766
Pathway-Level Records
8973
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
8973
Family-Level Calls
BAHD
6.34%
4CL
5.35%
C3'H/CYP98A
5.04%
C4H
4.93%
POD
4.74%
NMT
3.61%
UGT
3.6%
IFS
3.29%
Other Families
63.11%
More Families (98)
UFGT
287
3.2%
7DLGT
284
3.17%
CYP76
272
3.03%
T3O
270
3.01%
F3H
262
2.92%
STR
198
2.21%
DWF4/CYP90B1
178
1.98%
SMT1/SMT2/SMT3
171
1.91%
CODM/T6ODM
163
1.82%
F3'H/CYP75B
154
1.72%
H6H
139
1.55%
CAD
139
1.55%
CYP71
139
1.55%
CAS
132
1.47%
BR6OX2/CYP85A2
115
1.28%
LAC
114
1.27%
SGD
111
1.24%
TRI/TRII
107
1.19%
CSE
101
1.13%
IFR
97
1.08%
CYP90D1
93
1.04%
COMT
87
0.97%
GS
79
0.88%
HCT
77
0.86%
PMT
68
0.76%
RAS
68
0.76%
T16H
64
0.71%
ANR
64
0.71%
CCR
59
0.66%
PYKS
57
0.64%
COR
57
0.64%
BBE
54
0.6%
TPS
52
0.58%
8HGO
50
0.56%
IO
50
0.56%
16OMT
50
0.56%
GES
50
0.56%
SLS
47
0.52%
CPR
47
0.52%
7DLH
46
0.51%
G8O/G8H
45
0.5%
BR6OX1/CYP85A1
43
0.48%
ANS/LDOX
40
0.45%
FNS
40
0.45%
MPO
39
0.43%
TAT
36
0.4%
NCS
35
0.39%
CPD/CYP90A1
35
0.39%
LAMT
34
0.38%
F3'5'H/CYP75A
33
0.37%
DFR
33
0.37%
F5H/CYP84A
33
0.37%
CNMT
32
0.36%
SQS/FDFT1
29
0.32%
DXS
29
0.32%
PAL
27
0.3%
ROT3/CYP90C1
27
0.3%
CCoAOMT
25
0.28%
CYP51G1
25
0.28%
AACT
25
0.28%
CHS
22
0.25%
HPPR
19
0.21%
SQE
19
0.21%
TDC
18
0.2%
MVD
18
0.2%
SMO1/SMO2
17
0.19%
CYP719
16
0.18%
GGPPS
14
0.16%
FPPS
14
0.16%
ADC
13
0.14%
DET2
13
0.14%
DWF1
13
0.14%
MVK
13
0.14%
CHI
12
0.13%
HMGS
11
0.12%
HMGR
10
0.11%
DXR
10
0.11%
FLS
9
0.1%
ISY
8
0.09%
TYDC_DDC
7
0.08%
CYP80B1
7
0.08%
MCT/IspD
7
0.08%
DWF7
6
0.07%
HDR/IspH
6
0.07%
HDS/IspG
6
0.07%
XMT_MXMT_DXMT
5
0.06%
CPI1
4
0.04%
HYD1
4
0.04%
6OMT_4OMT_SOMT
3
0.03%
CYP80F1
3
0.03%
DWF5
3
0.03%
GPPS
3
0.03%
IDI
3
0.03%
CMK/IspE
3
0.03%
ODC
2
0.02%
FK
2
0.02%
PMK
2
0.02%
MDS/IspF
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 992 | 20 | BAHD (438) | View species results |
| Phenylpropanoid pathway | 901 | 12 | POD (400) | View species results |
| Alkaloid pathway | 859 | 24 | NMT (189) | View species results |
| Flavonoid pathway | 435 | 11 | UFGT (255) | View species results |
| Rosmarinic acid pathway | 292 | 7 | C4H (90) | View species results |
| Steroid pathway | 287 | 13 | CAS (118) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2884 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 714 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gsoj03G0022560.4 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gsoj03G0022560.5 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gsoj03G0022560.6 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gsoj03G0022560.7 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gsoj03G0023030.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Gsoj03G0025500.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gsoj03G0025500.2 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Gsoj04G0002020.1 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| Gsoj04G0007270.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Gsoj04G0007270.2 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Gsoj04G0011980.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Gsoj04G0011980.2 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Gsoj04G0011980.3 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Gsoj04G0011980.4 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Gsoj04G0011980.5 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Gsoj04G0011980.6 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Gsoj04G0012840.1 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Gsoj04G0014570.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Gsoj04G0014570.2 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Gsoj04G0014580.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Gsoj04G0020970.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Gsoj04G0022210.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Gsoj04G0023060.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Gsoj04G0023060.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj04G0023060.3 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj04G0023930.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gsoj04G0023930.2 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gsoj04G0023930.3 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gsoj04G0024750.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj04G0024750.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj04G0024750.3 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj04G0024750.4 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj05G0005770.1 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Gsoj05G0024440.1 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gsoj05G0024440.2 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gsoj05G0024440.3 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Gsoj06G0001900.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Gsoj06G0007200.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Gsoj06G0010430.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj06G0010430.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj06G0010430.3 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj06G0011330.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gsoj06G0011330.2 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gsoj06G0011330.3 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Gsoj06G0012310.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj06G0012310.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Gsoj06G0013190.2 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Gsoj06G0014540.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Gsoj06G0014540.2 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Gsoj06G0020660.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |